Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 ADI1P3-201ENST00000549509 470 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC245505.1-201ENST00000556398 224 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 HMGN2P15-201ENST00000585707 270 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 MTND4LP5-201ENST00000605152 292 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 DUSP12P1-201ENST00000612874 516 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AP001486.3-201ENST00000615334 372 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL359547.2-201ENST00000615810 418 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC011155.2-201ENST00000623202 216 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 ZNF680P1-201ENST00000436625 1469 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC093010.3-201ENST00000570269 15214 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC126755.2-208ENST00000327792 462 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC138969.1-213ENST00000331436 462 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 FRG1CP-201ENST00000358464 769 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 RNU6-1120P-201ENST00000362988 108 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 RNU4-48P-201ENST00000365559 182 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 CD24P4-201ENST00000382840 243 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 CISD1P1-201ENST00000393907 327 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AL365496.1-201ENST00000426885 215 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC022364.2-201ENST00000457963 554 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC104472.2-201ENST00000469035 601 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC126182.1-201ENST00000478134 357 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 SAP18P1-201ENST00000512058 390 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 MIR2276-201ENST00000516886 89 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 RNU6-143P-201ENST00000516942 93 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 RNU6-685P-201ENST00000517088 95 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 SNORA31.21-201ENST00000517180 77 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC009902.1-201ENST00000519351 183 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC104027.1-201ENST00000521887 300 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 H3F3AP1-201ENST00000559984 334 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AC010591.1-201ENST00000603941 649 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 NUTF2P8-201ENST00000604593 363 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AL590392.1-201ENST00000604960 446 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AL161629.2-201ENST00000615347 275 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 U4.6-201ENST00000621618 127 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 AL356274.2-201ENST00000624379 3752 ntBASIC2.95□□□□□ -1.94
CHMP1AQ9HD42 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 SNORD56.3-201ENST00000363507 71 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 RPS4XP8-201ENST00000402039 771 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 SNORA11B-201ENST00000408175 129 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC080125.1-201ENST00000414888 684 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AL160275.3-201ENST00000423876 471 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC008264.1-201ENST00000447612 367 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AL162395.1-201ENST00000457882 422 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 RPS29P15-201ENST00000458329 171 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 CENPBD1P1-201ENST00000464061 469 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC079382.1-201ENST00000493346 557 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AP002812.1-201ENST00000495378 474 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 RNU6-720P-201ENST00000516363 108 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 RNU6-703P-201ENST00000516946 107 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 RNU6-1315P-201ENST00000517187 99 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC010653.1-201ENST00000571108 881 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC012468.1-201ENST00000604888 430 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC126118.1-201ENST00000607744 628 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AL158209.2-201ENST00000619266 216 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 SNORD39.4-201ENST00000620099 78 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AP003122.6-201ENST00000623831 495 ntBASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP1AQ9HD42 ZNF285B-201ENST00000561698 1767 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms