Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AL590084.2-201ENST00000401481 382 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC099548.1-201ENST00000421443 426 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC009414.1-201ENST00000427200 443 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 snoU13.15-201ENST00000459407 104 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MRPL42P6-201ENST00000486397 371 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC034244.1-201ENST00000507687 207 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 HMGN1P28-201ENST00000521340 364 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 SUB1P1-201ENST00000524415 382 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC013828.2-201ENST00000532487 235 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AP000873.5-201ENST00000533906 236 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC090888.1-201ENST00000561335 1141 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MIR4648-201ENST00000580107 72 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MIR3616-201ENST00000584070 92 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC005498.1-201ENST00000592125 465 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC072039.2-201ENST00000608883 439 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC013476.2-201ENST00000614456 459 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC068787.1-201ENST00000623908 691 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MIR203B-201ENST00000636080 86 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AC016717.2-201ENST00000609089 5141 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 AL049641.1-201ENST00000441055 1948 ntBASIC2.78□□□□□ -1.97
RPAP3Q9H6T3 AC007785.2-201ENST00000598627 1916 ntBASIC2.78□□□□□ -1.97
RPAP3Q9H6T3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RNU1-73P-201ENST00000383971 164 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RN7SKP140-201ENST00000411196 284 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 MTCO2P17-201ENST00000424336 677 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL356320.1-201ENST00000429616 163 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 MTND1P20-201ENST00000430341 950 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RPL35AP22-201ENST00000436855 335 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 Z73417.1-201ENST00000447373 778 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RPS15AP27-201ENST00000449183 343 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 FDX1P2-201ENST00000450769 375 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL109741.2-201ENST00000455561 343 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RPS20P20-201ENST00000460498 340 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RNU6-390P-201ENST00000516259 103 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AP001372.4-201ENST00000524889 472 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AP002748.2-201ENST00000528671 348 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC023050.2-201ENST00000544968 387 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 MIR544B-201ENST00000582372 78 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AF038458.1-201ENST00000588406 262 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL356280.1-201ENST00000603614 379 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AC079395.3-201ENST00000615161 484 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 MTND5P33-201ENST00000571250 1450 ntBASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.97
RPAP3Q9H6T3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 SNORD113-6-201ENST00000363345 75 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 RNA5SP88-201ENST00000365560 109 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 TXNP7-201ENST00000406296 293 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 BTF3P7-201ENST00000407097 488 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AL359704.1-201ENST00000411586 781 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 Z85995.1-201ENST00000415547 335 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 BX276092.3-201ENST00000424182 230 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 PIGFP3-201ENST00000441918 722 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 CBWD4P-201ENST00000445695 655 ntBASIC2.76□□□□□ -1.97
RPAP3Q9H6T3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms