Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS16Q9H269 MIR4293-201ENST00000584305 78 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AC067852.3-201ENST00000589177 561 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 VN1R80P-201ENST00000597126 338 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC013553.2-201ENST00000604244 589 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 AC103710.2-201ENST00000609912 942 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 SDAD1P2-201ENST00000441308 2028 ntBASIC3.81□□□□□ -1.8
VPS16Q9H269 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS16Q9H269 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS16Q9H269 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS16Q9H269 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS16Q9H269 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.81□□□□□ -1.8
VPS16Q9H269 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RNU6-50P-201ENST00000362356 103 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RNU5A-1-201ENST00000362698 116 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 Y_RNA.419-201ENST00000384041 102 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 SNORA57.1-201ENST00000391227 145 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AL354719.1-201ENST00000406535 843 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RNU2-9P-201ENST00000410194 145 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RNU6-1148P-201ENST00000410992 104 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS16Q9H269 USP9YP20-201ENST00000419224 558 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AL353678.1-201ENST00000422735 741 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 CBWD4P-201ENST00000445695 655 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 HMGB3P8-201ENST00000449709 577 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC140076.1-201ENST00000449897 361 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 CACYBPP2-201ENST00000453625 678 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS16Q9H269 SNORD97-201ENST00000459187 142 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 HSPE1P6-201ENST00000479457 291 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS16Q9H269 RNA5SP468-201ENST00000516782 93 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS16Q9H269 FAM60DP-201ENST00000524174 632 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC243972.3-201ENST00000539655 198 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC093012.1-202ENST00000549403 582 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 MIR3921-201ENST00000577308 85 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AC105224.1-201ENST00000587055 421 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AP002826.1-201ENST00000608835 315 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 DISC2.1-201ENST00000612827 205 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC244100.1-202ENST00000621554 382 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VPS16Q9H269 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
VPS16Q9H269 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS16Q9H269 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS16Q9H269 HSPE1P11-201ENST00000339579 310 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RNU6-511P-201ENST00000363496 107 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 Y_RNA.326-201ENST00000365176 113 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RNU6-108P-201ENST00000365558 107 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AL122016.1-201ENST00000403365 367 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 MIR1302-11-201ENST00000408051 138 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 MIR1302-9-201ENST00000408365 138 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 MIR1302-10-201ENST00000408734 138 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS16Q9H269 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS16Q9H269 CRYBB2P1-203ENST00000415709 538 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AL035423.1-201ENST00000420331 213 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS16Q9H269 AF228730.4-201ENST00000421457 183 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RPL27AP8-201ENST00000424277 446 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 BNIP3P2-201ENST00000441221 577 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 MTCYBP6-201ENST00000441810 138 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS16Q9H269 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC010631.1-201ENST00000474150 156 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC233702.1-201ENST00000482905 502 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS16Q9H269 AL359273.1-201ENST00000510918 627 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC112206.3-201ENST00000514578 389 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RNU6-390P-201ENST00000516259 103 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 RNU6-277P-201ENST00000516272 106 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AP005639.2-201ENST00000527592 928 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.79□□□□□ -1.8
VPS16Q9H269 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS16Q9H269 RPL21P12-201ENST00000559810 515 ntBASIC3.79□□□□□ -1.8
VPS16Q9H269 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms