Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 SYF2P1-201ENST00000550658 413 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 HIF1AP1-201ENST00000553642 175 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 SUB1P2-201ENST00000556401 297 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.51□□□□□ -1.85
CDT1Q9H211 MIR4293-201ENST00000584305 78 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC025449.1-201ENST00000603896 529 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 AC004696.1-201ENST00000614345 607 ntBASIC3.51□□□□□ -1.85
CDT1Q9H211 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.51□□□□□ -1.85
CDT1Q9H211 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDT1Q9H211 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.51□□□□□ -1.85
CDT1Q9H211 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
CDT1Q9H211 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
CDT1Q9H211 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 HSPA8P1-201ENST00000425843 1833 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC009812.4-201ENST00000569134 1805 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RNU6-223P-201ENST00000362830 107 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 SNORD56.2-201ENST00000363242 71 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RNU6-511P-201ENST00000363496 107 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 U3.11-201ENST00000364476 212 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 Y_RNA.813-201ENST00000364639 102 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 SNORA23-201ENST00000365128 182 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RNU6-39P-201ENST00000384344 107 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 NDUFB4P4-201ENST00000404822 243 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.5□□□□□ -1.85
CDT1Q9H211 RPL21P24-201ENST00000413752 448 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC007390.1-201ENST00000415722 356 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 RPL23AP30-201ENST00000432419 501 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 UBE2V1P7-201ENST00000446395 340 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RPL23AP20-201ENST00000447965 421 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 FDX1P2-201ENST00000450769 375 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 MTND3P10-201ENST00000450967 341 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.5□□□□□ -1.85
CDT1Q9H211 HMGN2P16-201ENST00000456802 261 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 SNORA59A-201ENST00000459326 152 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RN7SL863P-201ENST00000462370 296 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CDT1Q9H211 HMGB3P15-201ENST00000507326 574 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 SCARNA24.1-201ENST00000516465 137 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 SNORA31.22-201ENST00000517204 135 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 RN7SKP289-201ENST00000517244 295 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC090572.1-201ENST00000519251 160 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 ARL2BPP2-201ENST00000550907 489 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.5□□□□□ -1.85
CDT1Q9H211 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 AC012507.3-201ENST00000603556 477 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC007363.1-201ENST00000604736 620 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC008945.2-201ENST00000606056 604 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AP001330.5-201ENST00000607176 411 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 MIR3662-201ENST00000637030 95 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AC099654.10-201ENST00000640395 161 ntBASIC3.5□□□□□ -1.85
CDT1Q9H211 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDT1Q9H211 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CDT1Q9H211 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDT1Q9H211 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CDT1Q9H211 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDT1Q9H211 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
CDT1Q9H211 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDT1Q9H211 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDT1Q9H211 Y_RNA.160-201ENST00000363677 92 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RNU6-76P-201ENST00000384060 104 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RNU6-456P-201ENST00000384493 107 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AL353678.1-201ENST00000422735 741 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 DUTP6-201ENST00000425573 462 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 MTATP6P4-201ENST00000427725 675 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RPL7P54-201ENST00000438336 674 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 HMGB3P11-201ENST00000440127 604 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RPL26P6-201ENST00000440913 438 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC023194.1-201ENST00000493084 308 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 NIPA2P2-201ENST00000496376 1083 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.49□□□□□ -1.85
CDT1Q9H211 AC018710.1-201ENST00000506509 158 ntBASIC3.49□□□□□ -1.85
CDT1Q9H211 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms