Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 ELL2P3-201ENST00000457883 1602 ntBASIC3.08□□□□□ -1.92
KLHL4Q9C0H6 RNY1P12-201ENST00000364251 105 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RNA5SP267-201ENST00000364893 126 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RNU6-946P-201ENST00000383878 107 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 MIR558-201ENST00000384920 94 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RNU6-248P-201ENST00000410720 107 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 BX323014.1-201ENST00000412876 237 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 ATG3P1-201ENST00000419507 911 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AC007283.2-201ENST00000424739 197 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 MED13P1-201ENST00000428342 171 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 GAPDHP17-201ENST00000449858 1001 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RN7SL601P-201ENST00000471221 293 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RPS27P26-201ENST00000494583 239 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RAC1P5-201ENST00000512182 576 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 Vault.3-201ENST00000516676 95 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 HMGB1P41-201ENST00000520234 440 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AC022616.3-201ENST00000523940 148 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 NACAP3-201ENST00000552100 481 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RPL21P12-201ENST00000559810 515 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 RPL23AP78-201ENST00000599928 470 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 BNIP3P9-201ENST00000603714 553 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 AL356321.1-201ENST00000621360 228 ntBASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.07□□□□□ -1.92
KLHL4Q9C0H6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 Y_RNA.77-201ENST00000362962 107 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RNA5SP197-201ENST00000363357 119 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RNU1-73P-201ENST00000383971 164 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RNU6-297P-201ENST00000384636 107 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 SNORD17-201ENST00000390930 237 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AL353678.1-201ENST00000422735 741 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RPL36AP53-201ENST00000432891 316 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC104850.1-201ENST00000435940 476 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 MTND4P25-201ENST00000441039 533 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AL022238.1-201ENST00000442557 355 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RBMY2UP-201ENST00000453474 324 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 BX510359.1-201ENST00000456973 237 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 Y_RNA.695-201ENST00000516715 107 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 RNU6-143P-201ENST00000516942 93 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 AP003072.2-201ENST00000527756 676 ntBASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.06□□□□□ -1.92
KLHL4Q9C0H6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 RNU1-33P-201ENST00000364249 162 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 SNORA20.2-201ENST00000383922 131 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 Y_RNA.534-201ENST00000384599 112 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 MIR767-201ENST00000390228 109 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 RN7SKP142-201ENST00000411236 328 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AC127391.1-201ENST00000411737 98 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 BPY2DP-201ENST00000422208 265 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 SKA2P1-201ENST00000425592 390 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 GTF2IP20-201ENST00000431663 360 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AL591704.1-201ENST00000432574 275 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AC005019.1-201ENST00000436455 431 ntBASIC3.05□□□□□ -1.92
KLHL4Q9C0H6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms