Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP219-201ENST00000390940 113 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-817P-201ENST00000391083 104 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 snosnR66.1-201ENST00000391095 99 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP239-201ENST00000410218 129 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 BX682237.1-201ENST00000415016 335 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC092809.3-201ENST00000415453 231 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 HMGB1P27-201ENST00000431429 603 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AL591704.1-201ENST00000432574 275 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 OR4C10P-201ENST00000434991 931 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC110792.1-201ENST00000491826 472 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AP000889.2-201ENST00000532684 490 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AL121821.2-201ENST00000556081 394 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AC005951.2-201ENST00000576282 495 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 POLR3GP2-201ENST00000588366 668 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 SNRPGP15-201ENST00000600149 222 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP196-201ENST00000625967 102 ntBASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
AMBRA1Q9C0C7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC006504.1-201ENST00000562493 3666 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RNA5SP387-201ENST00000364226 106 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-335P-201ENST00000364563 113 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 Y_RNA.333-201ENST00000365274 102 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-434P-201ENST00000384376 107 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 HSPE1P8-201ENST00000406997 288 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RPS12P24-201ENST00000412619 387 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC074085.1-201ENST00000413598 418 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AL354751.2-201ENST00000415471 210 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RN7SL542P-201ENST00000467147 294 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AL132838.2-201ENST00000492041 314 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 TRBVA-201ENST00000498804 316 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 SCARNA15.1-201ENST00000516384 125 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-566P-201ENST00000516790 107 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-273P-201ENST00000516937 96 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC135001.1-201ENST00000544546 283 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AL355836.1-201ENST00000555951 870 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 MIR3672-201ENST00000584290 82 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC022893.3-201ENST00000607665 437 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 U2.17-201ENST00000611454 95 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
AMBRA1Q9C0C7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AP001486.2-201ENST00000561652 5113 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SNORA60-201ENST00000362396 134 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RNU5A-1-201ENST00000362698 116 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SNORA63-201ENST00000363450 132 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RNU6-715P-201ENST00000365204 103 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 SNORA16.2-201ENST00000390991 127 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AL139039.1-201ENST00000401900 692 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 RPL7P10-201ENST00000417407 739 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 BX842559.1-201ENST00000419615 532 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 MTCO2P12-201ENST00000427426 682 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 AC007389.2-201ENST00000434630 306 ntBASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AMBRA1Q9C0C7 PRDX3P3-201ENST00000447765 522 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms