Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UBE2V1P4-201ENST00000425374 344 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 RPL31P60-201ENST00000478450 367 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC092436.3-201ENST00000511788 257 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 SNORA31.3-201ENST00000516029 96 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 RN7SKP258-201ENST00000517151 304 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC012119.1-201ENST00000603184 222 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AL160290.3-201ENST00000604869 165 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 AC107871.2-201ENST00000612894 502 ntBASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
FOXP3Q9BZS1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-1059P-201ENST00000363752 98 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-266P-201ENST00000364225 107 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 DEFB109C-201ENST00000382575 264 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 DEFB109B-201ENST00000382656 264 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-842P-201ENST00000384269 107 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 Y_RNA.480-201ENST00000384364 102 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-823P-201ENST00000391042 103 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-101P-201ENST00000410323 104 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC097713.2-201ENST00000430199 356 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC099799.1-201ENST00000439809 192 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU6-953P-201ENST00000459154 107 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 snoU13.3-201ENST00000459441 104 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU7-138P-201ENST00000459479 64 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RPL37P6-201ENST00000460682 294 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 RNU4-77P-201ENST00000516692 156 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 ERHP1-201ENST00000523006 310 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 OR4H12P-201ENST00000556269 907 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC023575.1-201ENST00000580510 358 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AL020997.2-201ENST00000602607 184 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC002044.1-201ENST00000606707 158 ntBASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXP3Q9BZS1 AC091812.1-201ENST00000432235 1948 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 RNU6-379P-201ENST00000363813 104 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 RNU2-43P-201ENST00000410306 190 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 RNU2-23P-201ENST00000410545 195 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 MIR1911-201ENST00000410783 80 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 RNU4-78P-201ENST00000410940 126 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AL162591.2-201ENST00000449634 317 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AC112492.4-201ENST00000456549 352 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AC011276.1-201ENST00000469688 323 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 RPS27AP13-201ENST00000498403 237 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AC009901.1-201ENST00000506703 541 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AC084783.1-201ENST00000565846 910 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 SNORD58B-201ENST00000607313 66 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 SDR42E1P2-201ENST00000614861 481 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 MIR4727-201ENST00000622232 55 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AL606534.2-204ENST00000635008 178 ntBASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXP3Q9BZS1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 AC025031.4-201ENST00000621248 3271 ntBASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXP3Q9BZS1 RNU6-371P-201ENST00000364283 108 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms