Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 NUTF2P8-201ENST00000604593 363 ntBASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 Z98200.1-201ENST00000607298 470 ntBASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 RNU4-89P-201ENST00000607443 133 ntBASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM55Q9BYV6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC118273.1-201ENST00000525324 3006 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AP001486.2-201ENST00000561652 5113 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 FTLP6-201ENST00000355274 422 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 SNORD14B-201ENST00000364533 90 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 RNU6-384P-201ENST00000364900 104 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 Y_RNA.419-201ENST00000384041 102 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 SNORA40C-201ENST00000391285 128 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 RNA5SP39-201ENST00000411245 120 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 TMEM167AP1-201ENST00000423409 219 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL583843.1-201ENST00000456070 346 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 SNORD19B-201ENST00000459623 84 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 RPL36AP41-201ENST00000493820 306 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 RPS27P27-201ENST00000498779 255 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC093840.1-201ENST00000511599 336 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 SNORA31.19-201ENST00000517079 126 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 FRG2DP-202ENST00000566967 323 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL020997.2-201ENST00000602607 184 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL160290.3-201ENST00000604869 165 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 MIR432-201ENST00000606207 94 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL160413.1-201ENST00000622780 310 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL359757.2-201ENST00000624309 274 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AC068724.3-201ENST00000625906 87 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 NCAPGP1-201ENST00000505112 1814 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 ZNF807-201ENST00000328088 1707 ntBASIC4.41□□□□□ -1.7
TRIM55Q9BYV6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM55Q9BYV6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.4□□□□□ -1.7
TRIM55Q9BYV6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.4□□□□□ -1.7
TRIM55Q9BYV6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM55Q9BYV6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM55Q9BYV6 RNA5SP388-201ENST00000362584 119 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 RNU6-1297P-201ENST00000384415 104 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 MIR1193-201ENST00000408109 78 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.623-201ENST00000411128 95 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 RPL17P36-201ENST00000420302 549 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 SKA2P1-201ENST00000425592 390 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC018644.1-201ENST00000429934 551 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC236972.2-201ENST00000434979 310 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 NDUFB1P2-201ENST00000449477 176 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 ANP32BP2-201ENST00000454525 545 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 RPL9P32-201ENST00000464118 620 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 RN7SKP21-201ENST00000516503 220 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AP005597.4-201ENST00000526762 229 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC074050.1-201ENST00000563247 211 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC023575.1-201ENST00000580510 358 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 RNU6-85P-201ENST00000605989 107 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 FTX_3.1-201ENST00000610451 147 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 AC022336.2-201ENST00000568966 2538 ntBASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM55Q9BYV6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 Y_RNA.431-201ENST00000384086 102 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 RNU6-214P-201ENST00000384130 107 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AL022722.2-201ENST00000402519 180 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 AL591034.1-201ENST00000407447 340 ntBASIC4.39□□□□□ -1.71
TRIM55Q9BYV6 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms