Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC243773.3-201ENST00000613270 256 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC025588.4-201ENST00000615802 908 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 UCA1.1-201ENST00000620952 75 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 CR848007.1-201ENST00000442354 1699 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AL137003.2-201ENST00000606924 2538 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 SNORA51.12-201ENST00000384448 134 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 OR6C66P-201ENST00000414917 930 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 TRIM60P13-201ENST00000432350 1283 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC093770.1-201ENST00000511559 571 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC087854.1-201ENST00000519706 414 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AP004247.1-201ENST00000531556 1289 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 IMMP1LP2-201ENST00000552954 492 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 MIR4714-201ENST00000580728 77 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC112191.3-201ENST00000604371 277 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC106052.1-201ENST00000608029 497 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC095038.3-201ENST00000634439 195 ntBASIC1.48□□□□□ -2.17
SCAPERQ9BY12 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 RNU6-37P-201ENST00000362692 107 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 RNU6-11P-201ENST00000364234 107 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 RNU4-78P-201ENST00000410940 126 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AC005534.2-201ENST00000431047 433 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 OSTCP8-201ENST00000445117 448 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 MIR3616-201ENST00000584070 92 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 ZNF92P3-201ENST00000596594 954 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AL355812.1-201ENST00000603215 216 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AP001330.4-201ENST00000604350 154 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AC106900.2-201ENST00000604994 317 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AL022578.1-201ENST00000439330 1433 ntBASIC1.47□□□□□ -2.17
SCAPERQ9BY12 AC025263.3-201ENST00000622965 1396 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 Y_RNA.30-201ENST00000362572 97 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 RNU6-263P-201ENST00000363811 107 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 EBAG9P1-201ENST00000418955 543 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC244453.4-201ENST00000419150 388 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC246680.2-201ENST00000422106 389 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AL365496.1-201ENST00000426885 215 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC079780.1-201ENST00000428259 207 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC244035.1-201ENST00000430042 390 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AL596276.1-201ENST00000434465 418 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 BUD31P2-201ENST00000449374 300 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.46□□□□□ -2.18
SCAPERQ9BY12 SNORD97-201ENST00000459187 142 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AC111000.5-201ENST00000506559 1178 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 SNRPGP16-201ENST00000533275 226 ntBASIC1.46□□□□□ -2.18
SCAPERQ9BY12 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.46□□□□□ -2.18
SCAPERQ9BY12 RNU1-105P-201ENST00000363470 161 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 RNU6-1243P-201ENST00000364028 107 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.45□□□□□ -2.18
SCAPERQ9BY12 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.45□□□□□ -2.18
SCAPERQ9BY12 TPTE2P6-202ENST00000445572 1007 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.45□□□□□ -2.18
SCAPERQ9BY12 ANKRD26P4-201ENST00000455755 950 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AL359385.1-201ENST00000456509 365 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AC107032.1-201ENST00000485945 480 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.45□□□□□ -2.18
SCAPERQ9BY12 CBX3P8-201ENST00000532412 525 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 CBX3P7-201ENST00000532876 502 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AL109918.3-201ENST00000603072 338 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AC087359.1-201ENST00000508335 1740 ntBASIC1.45□□□□□ -2.18
SCAPERQ9BY12 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AC010889.1-201ENST00000566193 2666 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 RNU5D-1-201ENST00000363299 116 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 RNA5SP56-201ENST00000410277 118 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 RNU6-920P-201ENST00000410926 92 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AL034418.1-201ENST00000448675 860 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 TRGVB-201ENST00000453257 471 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AC104689.1-201ENST00000473356 768 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 COL6A4P2-205ENST00000509855 506 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 MIR3609-201ENST00000582661 80 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AC025594.3-201ENST00000613068 790 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 AC109454.4-201ENST00000623411 649 ntBASIC1.44□□□□□ -2.18
SCAPERQ9BY12 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.44□□□□□ -2.18
SCAPERQ9BY12 MT-TC-201ENST00000387405 66 ntBASIC1.43□□□□□ -2.18
SCAPERQ9BY12 U3.20-201ENST00000390909 217 ntBASIC1.43□□□□□ -2.18
SCAPERQ9BY12 RNU6-882P-201ENST00000391025 103 ntBASIC1.43□□□□□ -2.18
SCAPERQ9BY12 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.43□□□□□ -2.18
SCAPERQ9BY12 OFD1P18Y-201ENST00000420889 959 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms