Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC073901.1-201ENST00000462471 408 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 SNORA31.3-201ENST00000516029 96 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNU1-86P-201ENST00000516108 154 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNU1-103P-201ENST00000516502 125 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNU1-107P-201ENST00000516617 154 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNU6-914P-201ENST00000516749 109 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNU6-612P-201ENST00000516909 102 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AC090281.1-201ENST00000523019 276 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AC115990.1-201ENST00000526957 301 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AC055872.1-201ENST00000570978 278 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RPL23AP87-202ENST00000573039 466 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RMST_4.1-201ENST00000616886 107 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 AC020633.1-201ENST00000468439 2247 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 SALL4P2-201ENST00000423288 2910 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RNU6-989P-201ENST00000362756 107 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.542-201ENST00000384641 111 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RNU2-2P-201ENST00000410396 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AL390729.2-201ENST00000416137 156 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AL357134.1-201ENST00000445848 426 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AL133547.1-201ENST00000448546 220 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RPS5P7-201ENST00000456664 608 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 snoU13.7-201ENST00000459220 104 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 MIR5582-201ENST00000579697 68 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RNU2-4P-201ENST00000606190 192 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.15-201ENST00000611544 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.16-201ENST00000613119 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.12-201ENST00000613778 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.9-201ENST00000615427 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.11-201ENST00000616345 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.2-201ENST00000616535 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.3-201ENST00000617785 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.19-201ENST00000618602 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RNU2-1-201ENST00000618664 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.6-201ENST00000619225 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.5-201ENST00000619465 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 U2.10-201ENST00000620268 191 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AC073869.8-201ENST00000641806 335 ntBASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.06□□□□□ -1.6
COL25A1Q9BXS0 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 MTND5P32-201ENST00000560711 1802 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.121-201ENST00000363309 113 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 RNU6-318P-201ENST00000384283 103 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 RNU6-476P-201ENST00000384726 107 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 RNU11-201ENST00000387069 134 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL356387.2-201ENST00000422272 243 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL117339.2-201ENST00000430475 180 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 BX323845.1-201ENST00000432417 179 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 RANP8-201ENST00000444720 713 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AC073587.1-201ENST00000447093 876 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 MRPS10P1-201ENST00000448483 130 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AL132838.2-201ENST00000492041 314 ntBASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.05□□□□□ -1.6
COL25A1Q9BXS0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms