Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OR1M4P-201ENST00000589199 287 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AP001330.4-201ENST00000604350 154 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 HSPE1P7-201ENST00000604681 321 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 HMGB1P24-202ENST00000615653 685 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC011330.2-201ENST00000621680 635 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC068880.5-201ENST00000624331 290 ntBASIC1.59□□□□□ -2.15
IFT140Q96RY7 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
IFT140Q96RY7 RNU6-1243P-201ENST00000364028 107 ntBASIC1.58□□□□□ -2.16
IFT140Q96RY7 SNORA3A-201ENST00000364113 130 ntBASIC1.58□□□□□ -2.16
IFT140Q96RY7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.58□□□□□ -2.16
IFT140Q96RY7 AP000949.1-201ENST00000438328 629 ntBASIC1.58□□□□□ -2.16
IFT140Q96RY7 AL357134.1-201ENST00000445848 426 ntBASIC1.58□□□□□ -2.16
IFT140Q96RY7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.58□□□□□ -2.16
IFT140Q96RY7 AC108157.1-201ENST00000510511 539 ntBASIC1.58□□□□□ -2.16
IFT140Q96RY7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.58□□□□□ -2.16
IFT140Q96RY7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
IFT140Q96RY7 RNU1-62P-201ENST00000362599 164 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 RNU6-452P-201ENST00000384406 107 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 RNU6-233P-201ENST00000410845 141 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.57□□□□□ -2.16
IFT140Q96RY7 TMEM167AP1-201ENST00000423409 219 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.57□□□□□ -2.16
IFT140Q96RY7 RPS27AP10-201ENST00000496103 208 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.57□□□□□ -2.16
IFT140Q96RY7 SULT1C2P1-202ENST00000562418 459 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 AC090666.1-201ENST00000578241 445 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 AC106900.2-201ENST00000604994 317 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 BNIP3P7-201ENST00000605641 516 ntBASIC1.57□□□□□ -2.16
IFT140Q96RY7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
IFT140Q96RY7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
IFT140Q96RY7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
IFT140Q96RY7 RNU6-374P-201ENST00000364146 108 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC068050.1-201ENST00000394891 380 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 RNU6-193P-201ENST00000410977 107 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC023512.1-201ENST00000444513 499 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC010099.1-201ENST00000455434 375 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 CABYRP1-201ENST00000465493 1045 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC104689.1-201ENST00000473356 768 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
IFT140Q96RY7 MIR3117-201ENST00000584034 78 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AL161629.2-201ENST00000615347 275 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AL360181.4-201ENST00000621752 134 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 DEFB108F-201ENST00000344638 222 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 RNA5SP257-201ENST00000363023 116 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 Y_RNA.493-201ENST00000384422 102 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 MTATP6P31-201ENST00000406985 692 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AL161449.1-201ENST00000414531 1199 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC008850.1-201ENST00000427546 362 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC108078.1-201ENST00000508073 725 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.56□□□□□ -2.16
IFT140Q96RY7 AC004923.2-201ENST00000529649 369 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 SNRPGP16-201ENST00000533275 226 ntBASIC1.56□□□□□ -2.16
IFT140Q96RY7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.56□□□□□ -2.16
IFT140Q96RY7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.56□□□□□ -2.16
IFT140Q96RY7 RNA5SP258-201ENST00000362750 119 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 SNORA16B-201ENST00000364674 135 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 U8.14-201ENST00000390843 143 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 RNA5SP354-201ENST00000391247 136 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 MIR1285-1-201ENST00000408593 84 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 NAP1L1P3-201ENST00000462291 880 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 AC113398.2-201ENST00000507630 558 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 CBX3P8-201ENST00000532412 525 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 AL512605.2-201ENST00000592972 256 ntBASIC1.55□□□□□ -2.16
IFT140Q96RY7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.55□□□□□ -2.16
IFT140Q96RY7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
IFT140Q96RY7 MIR150-201ENST00000385048 84 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 MIR513A1-201ENST00000385138 129 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 CISD1P1-201ENST00000393907 327 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 RNA5SP56-201ENST00000410277 118 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.54□□□□□ -2.16
IFT140Q96RY7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.54□□□□□ -2.16
IFT140Q96RY7 AC234064.1-201ENST00000436312 247 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 ARF4P4-201ENST00000439608 520 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 RNF2P1-201ENST00000442955 1010 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 CBX3P7-201ENST00000532876 502 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 POLR2KP1-201ENST00000553226 168 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 AL669831.4-202ENST00000590817 238 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 FAM60CP-201ENST00000591086 664 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.54□□□□□ -2.16
IFT140Q96RY7 FAM71BP1-201ENST00000604431 523 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 AC016252.1-201ENST00000609721 474 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 AC018630.2-201ENST00000534866 2403 ntBASIC1.54□□□□□ -2.16
IFT140Q96RY7 HMGB1P49-201ENST00000418882 569 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 ARL2BPP3-201ENST00000421226 480 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 XKRYP1-201ENST00000423438 492 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 XKRYP2-201ENST00000432915 492 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 RPL31P41-201ENST00000477967 372 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 EIF4EP3-201ENST00000498782 656 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC105313.1-201ENST00000509121 353 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.53□□□□□ -2.16
IFT140Q96RY7 AC008562.1-201ENST00000521763 330 ntBASIC1.53□□□□□ -2.16
IFT140Q96RY7 MIR4504-201ENST00000577413 92 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms