Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHACTR3Q96KR7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PHACTR3Q96KR7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.21□□□□□ -1.73
PHACTR3Q96KR7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.21□□□□□ -1.73
PHACTR3Q96KR7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PHACTR3Q96KR7 OR4G1P-203ENST00000641984 1631 ntBASIC4.21□□□□□ -1.73
PHACTR3Q96KR7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 RNU4-20P-201ENST00000365601 151 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 SNORA7.4-201ENST00000384249 137 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 MIR153-1-201ENST00000384914 90 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL162578.1-201ENST00000406202 378 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 RN7SKP32-201ENST00000410167 303 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 RNA5SP56-201ENST00000410277 118 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL645937.1-202ENST00000421799 937 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL353678.1-201ENST00000422735 741 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 OR2AS1P-201ENST00000427827 319 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 RPL29P29-201ENST00000448725 423 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC078785.3-201ENST00000476607 425 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC126389.1-201ENST00000477436 290 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 Y_RNA.701-201ENST00000516812 110 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC105029.1-201ENST00000520250 669 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 HPRT1P3-201ENST00000539521 576 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC125611.2-201ENST00000551907 647 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL121603.1-201ENST00000553815 142 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 MIR4458-201ENST00000578872 75 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 MIR4424-201ENST00000585257 86 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AL050343.2-201ENST00000607338 280 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC004908.2-201ENST00000609090 574 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC005858.4-201ENST00000623191 700 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 AC040168.1-201ENST00000623594 991 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 MTCO1P24-201ENST00000515438 1558 ntBASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
PHACTR3Q96KR7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 PNPT1P2-201ENST00000456768 2050 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AL133412.1-201ENST00000380194 2992 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 SNORA54-201ENST00000384281 123 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 MT-TC-201ENST00000387405 66 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 MIR1250-201ENST00000408098 113 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 RNU6-193P-201ENST00000410977 107 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 OR4K11P-201ENST00000431829 904 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC005094.1-201ENST00000440420 368 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 RPL23AP33-201ENST00000442301 452 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 snoU13.24-201ENST00000458998 104 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 S100A11P2-201ENST00000467589 312 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 RPL21P103-201ENST00000479921 488 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC068305.1-201ENST00000497406 726 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC114797.1-201ENST00000514003 728 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 RNU6-1153P-201ENST00000516760 105 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC107953.1-201ENST00000522216 297 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC011979.2-201ENST00000527568 352 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC093027.1-201ENST00000546698 429 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 OR4K8P-201ENST00000578842 1048 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AL355812.1-201ENST00000603215 216 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC006329.2-201ENST00000611491 394 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 AC009248.2-201ENST00000619826 254 ntBASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
PHACTR3Q96KR7 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 U3.12-201ENST00000364498 214 ntBASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 RNU6-55P-201ENST00000411092 107 ntBASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 RNU6-954P-201ENST00000411355 107 ntBASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 Z92545.1-201ENST00000411782 234 ntBASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.19□□□□□ -1.74
PHACTR3Q96KR7 MTCYBP8-201ENST00000422855 651 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms