Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC104763.2-201ENST00000604179 382 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AL162713.1-201ENST00000604480 262 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC246785.4-201ENST00000605374 287 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC103591.3-201ENST00000608684 209 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC109347.2-201ENST00000610220 349 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 FTX_3.1-201ENST00000610451 147 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AL365204.3-201ENST00000612448 685 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC091834.1-201ENST00000614543 472 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 MIR6733-201ENST00000635723 61 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 AC009093.8-201ENST00000641769 292 ntBASIC4.1□□□□□ -1.75
CCDC136Q96JN2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC136Q96JN2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC073343.1-201ENST00000328239 651 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 Y_RNA.436-201ENST00000384097 102 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 RNU6-817P-201ENST00000391083 104 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC069157.1-201ENST00000421749 137 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC091286.1-201ENST00000431233 461 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 RPL23AP58-201ENST00000440453 469 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 RPL23AP20-201ENST00000447965 421 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 RN7SL499P-201ENST00000481141 276 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 MTCO3P7-201ENST00000510008 774 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 RNA5SP165-201ENST00000517142 115 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC136Q96JN2 MTND4LP5-201ENST00000605152 292 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 AC099842.1-201ENST00000619919 596 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 MTND5P42-201ENST00000637720 498 ntBASIC4.09□□□□□ -1.75
CCDC136Q96JN2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
CCDC136Q96JN2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC136Q96JN2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
CCDC136Q96JN2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 CD24P4-201ENST00000382840 243 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RNU6-190P-201ENST00000384154 102 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RNU2-39P-201ENST00000410604 198 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RNA5SP344-201ENST00000411081 104 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RPS12P24-201ENST00000412619 387 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 MED13P1-201ENST00000428342 171 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AL591212.2-201ENST00000433923 257 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 SNRPEP9-201ENST00000436794 238 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 ZNF519P1-201ENST00000449011 1626 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AC093899.1-201ENST00000457984 376 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RPL21P129-201ENST00000491732 478 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 RN7SKP298-201ENST00000515950 94 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 AC073648.5-201ENST00000603502 305 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.08□□□□□ -1.76
CCDC136Q96JN2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.08□□□□□ -1.76
CCDC136Q96JN2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RNU6-884P-201ENST00000363889 107 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RNU4-24P-201ENST00000364565 139 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RNU4-75P-201ENST00000364621 146 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 Y_RNA.318-201ENST00000365131 97 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC133104.1-201ENST00000429100 218 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 USP9YP14-201ENST00000430663 563 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RPL36AP53-201ENST00000432891 316 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 FABP5P13-201ENST00000452144 328 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RBMY2UP-201ENST00000453474 324 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 FABP5P15-201ENST00000453566 214 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RNU6-953P-201ENST00000459154 107 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RPS29P20-201ENST00000489592 171 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 RNU6-677P-201ENST00000516914 101 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC024909.2-201ENST00000553035 286 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AL391261.3-201ENST00000557194 520 ntBASIC4.07□□□□□ -1.76
CCDC136Q96JN2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms