Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RPL37P6-201ENST00000460682 294 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RNA5SP341-201ENST00000516261 117 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RN7SKP60-201ENST00000516985 239 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 NRON-201ENST00000517270 370 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RANP3-201ENST00000530970 276 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 OR5B19P-201ENST00000531766 928 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 ZNF192P1-203ENST00000565888 810 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 MIR3690-201ENST00000580266 75 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC174048.1-201ENST00000603389 144 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AL365204.3-201ENST00000612448 685 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 DISC2.1-201ENST00000612827 205 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC024940.5-201ENST00000622889 474 ntBASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM43Q96BQ3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL365361.1-201ENST00000566942 3481 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 NACAP2-201ENST00000318548 624 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 SNORD74.4-201ENST00000364129 80 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MIR513A2-201ENST00000385249 127 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RNU6-817P-201ENST00000391083 104 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL139413.1-201ENST00000421309 217 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MTCYBP8-201ENST00000422855 651 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 CALM2P2-201ENST00000428512 440 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL590383.1-201ENST00000428602 75 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MTATP6P23-201ENST00000440153 476 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RPL27AP5-201ENST00000469428 449 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC069439.1-201ENST00000494739 167 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MIR2114-201ENST00000516645 80 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RNA5SP468-201ENST00000516782 93 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MIR548S-201ENST00000581352 82 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AP001486.3-201ENST00000615334 372 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 U6.42-201ENST00000618440 107 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 AC099654.14-201ENST00000638599 341 ntBASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM43Q96BQ3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU6-451P-201ENST00000362921 107 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 SNORD115-7-201ENST00000365306 82 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL354719.1-201ENST00000406535 843 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU2-29P-201ENST00000410423 189 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC017079.2-201ENST00000416102 485 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AL162395.1-201ENST00000457882 422 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC104806.1-201ENST00000508720 308 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 SNORA70.16-201ENST00000516390 95 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 RNU6-358P-201ENST00000516564 75 ntBASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM43Q96BQ3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms