Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC005951.2-201ENST00000576282 495 ntBASIC1.95□□□□□ -2.1
CLDN23Q96B33 AC090615.1-201ENST00000577519 154 ntBASIC1.95□□□□□ -2.1
CLDN23Q96B33 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.95□□□□□ -2.1
CLDN23Q96B33 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.95□□□□□ -2.1
CLDN23Q96B33 RPS15AP11-201ENST00000594193 385 ntBASIC1.95□□□□□ -2.1
CLDN23Q96B33 AC243773.3-201ENST00000613270 256 ntBASIC1.95□□□□□ -2.1
CLDN23Q96B33 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CLDN23Q96B33 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN23Q96B33 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 DDX10P1-201ENST00000448545 1933 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN23Q96B33 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN23Q96B33 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 Y_RNA.508-201ENST00000384502 114 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 RNU6-920P-201ENST00000410926 92 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AL161449.1-201ENST00000414531 1199 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 ARF4P4-201ENST00000439608 520 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 Z82210.1-201ENST00000440037 231 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 CBWD4P-201ENST00000445695 655 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AP1S2P1-201ENST00000457344 379 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC008427.1-201ENST00000503102 655 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 MTCO3P27-201ENST00000514397 196 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AP003355.1-201ENST00000518956 587 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 IGLV3-17-201ENST00000519099 244 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC023825.1-201ENST00000566704 1030 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC011451.2-201ENST00000604303 598 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 MTND4LP5-201ENST00000605152 292 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AL359821.1-201ENST00000605519 182 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC008498.1-201ENST00000613012 531 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC245884.12-201ENST00000615364 59 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 HMGB1P24-202ENST00000615653 685 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 MIR8070-201ENST00000616510 88 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC002550.2-201ENST00000621246 394 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AL512643.1-201ENST00000635735 524 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN23Q96B33 MTND4P27-201ENST00000450813 1354 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CLDN23Q96B33 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.94□□□□□ -2.1
CLDN23Q96B33 AC005539.1-201ENST00000443768 1479 ntBASIC1.94□□□□□ -2.1
CLDN23Q96B33 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AL356473.1-201ENST00000406203 1408 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 Y_RNA.234-201ENST00000364409 97 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 RNU6-217P-201ENST00000384164 104 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 MIR499A-201ENST00000384903 122 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 SNORA67.5-201ENST00000391036 107 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AL021407.1-201ENST00000404531 386 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 U3.37-201ENST00000408528 213 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 MTCO2P5-201ENST00000422621 426 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC007919.1-201ENST00000429380 217 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 IPO7P1-201ENST00000442031 636 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC005840.1-201ENST00000498412 377 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC008628.1-201ENST00000508663 265 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC117532.1-201ENST00000514638 323 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC087897.1-201ENST00000550134 156 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 SUB1P3-201ENST00000564581 315 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC009127.3-201ENST00000570531 403 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 MIR4255-201ENST00000579351 72 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC099785.1-201ENST00000605697 437 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC005332.10-201ENST00000612725 619 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 AC109454.4-201ENST00000623411 649 ntBASIC1.93□□□□□ -2.1
CLDN23Q96B33 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.93□□□□□ -2.1
CLDN23Q96B33 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CLDN23Q96B33 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLDN23Q96B33 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN23Q96B33 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLDN23Q96B33 AL139276.1-201ENST00000311910 1001 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 Y_RNA.355-201ENST00000365462 98 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 AL109755.1-201ENST00000401791 649 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 RNU4-62P-201ENST00000410125 130 ntBASIC1.92□□□□□ -2.1
CLDN23Q96B33 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN23Q96B33 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms