Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 snoU109.1-201ENST00000459339 135 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC007834.2-201ENST00000536310 343 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC012119.1-201ENST00000603184 222 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC245389.1-201ENST00000605141 529 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 Z99129.2-201ENST00000619967 314 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 AC078883.4-201ENST00000623218 367 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 MIR3199-2-201ENST00000636243 86 ntBASIC2.95□□□□□ -1.94
VPS33AQ96AX1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.95□□□□□ -1.94
VPS33AQ96AX1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 FGF7P2-201ENST00000332473 296 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 SNORD116-8-201ENST00000384365 95 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AF228730.1-201ENST00000397972 663 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 RPS3AP36-201ENST00000398190 775 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 BRK1P2-201ENST00000442875 223 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 RPL21P41-201ENST00000459863 264 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC098591.2-201ENST00000510152 315 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 SNORD19.2-201ENST00000516978 73 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC023632.4-201ENST00000517783 191 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 HMGB1P41-201ENST00000520234 440 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 NCAPGP2-201ENST00000557911 754 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC008088.1-201ENST00000580993 280 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 Z94722.1-201ENST00000604328 474 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC121247.2-201ENST00000604776 136 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC022893.3-201ENST00000607665 437 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 Z99571.1-201ENST00000636677 394 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VPS33AQ96AX1 AL049781.1-201ENST00000623195 3585 ntBASIC2.94□□□□□ -1.94
VPS33AQ96AX1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 MTND4P35-201ENST00000604257 1375 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RNY1P12-201ENST00000364251 105 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RNU6-658P-201ENST00000384606 106 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AL357075.1-201ENST00000404107 726 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC080125.1-201ENST00000414888 684 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AL109913.1-201ENST00000421173 514 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC007283.2-201ENST00000424739 197 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 MED13P1-201ENST00000428342 171 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 OSTCP8-201ENST00000445117 448 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RPL39P40-201ENST00000445481 146 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 HMGN2P10-201ENST00000448085 265 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 SNRPGP9-201ENST00000456025 225 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC093899.1-201ENST00000457984 376 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RPL21P10-201ENST00000463521 490 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC107626.1-201ENST00000471084 183 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RAP1BP2-201ENST00000478270 544 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AP004217.1-201ENST00000480579 346 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RPS15AP34-201ENST00000487776 387 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AP002812.1-201ENST00000495378 474 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RNU6-914P-201ENST00000516749 109 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 RNU2-46P-201ENST00000517038 113 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 OSBPL9P5-201ENST00000542581 171 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 MTND3P12-201ENST00000559068 328 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AL512643.1-201ENST00000635735 524 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 AC010889.1-201ENST00000566193 2666 ntBASIC2.93□□□□□ -1.94
VPS33AQ96AX1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
VPS33AQ96AX1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
VPS33AQ96AX1 RNY3P10-201ENST00000384764 102 ntBASIC2.92□□□□□ -1.94
VPS33AQ96AX1 MIR558-201ENST00000384920 94 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms