Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VTI1AQ96AJ9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC233263.6-201ENST00000631132 1963 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 RNU6-1179P-201ENST00000384667 107 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 EIF4HP2-201ENST00000424380 563 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 CKS1BP6-201ENST00000424932 240 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 RPL7P2-201ENST00000427639 268 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC073910.1-201ENST00000445047 438 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 Vault.1-201ENST00000516474 102 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC015967.1-201ENST00000619893 476 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC138627.2-201ENST00000624202 601 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 TLK1P1-201ENST00000456760 2440 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 OR56B2P-202ENST00000641377 2453 ntBASIC5.3□□□□□ -1.56
VTI1AQ96AJ9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNA5SP52-201ENST00000362448 134 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.26-201ENST00000362539 101 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNY1P16-201ENST00000363063 111 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.214-201ENST00000364201 112 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNU6-512P-201ENST00000364438 103 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNA5SP509-201ENST00000364577 119 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.288-201ENST00000364854 92 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNU6-1074P-201ENST00000383995 104 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 Y_RNA.461-201ENST00000384263 103 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNU6-713P-201ENST00000384761 107 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 MT-TW-201ENST00000387382 68 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC140479.3-201ENST00000418944 1126 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RPL36AP10-201ENST00000421785 322 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 HSPE1P6-201ENST00000479457 291 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 RNU6-513P-201ENST00000516104 104 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC007224.1-201ENST00000564410 144 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 ARF4P1-201ENST00000605447 541 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 MIR3976-201ENST00000606807 139 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC023043.4-201ENST00000612081 449 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AL136164.3-201ENST00000624429 3978 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AC009643.2-201ENST00000603543 1448 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 AL445487.1-201ENST00000415694 1580 ntBASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
VTI1AQ96AJ9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AL356968.1-201ENST00000416622 474 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC244098.2-201ENST00000422068 99 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 ELOCP20-201ENST00000422460 345 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 HMGN2P13-201ENST00000476476 274 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 RPS15AP34-201ENST00000487776 387 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 RN7SL558P-201ENST00000497468 299 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 RNA5SP497-201ENST00000516081 97 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 SNORA31.9-201ENST00000516429 84 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 IGLVIV-65-201ENST00000517313 360 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC134698.5-201ENST00000519444 336 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AP000889.1-201ENST00000530968 660 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 MIR4273-201ENST00000582824 84 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 RNF138P2-201ENST00000603490 592 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 MTND4LP5-201ENST00000605152 292 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AL121917.1-203ENST00000605534 577 ntBASIC5.28□□□□□ -1.56
VTI1AQ96AJ9 AC091979.2-201ENST00000607514 214 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms