Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-CQ95604 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-CQ95604 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-CQ95604 MLLT10P2-201ENST00000506434 249 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 RNY3P16-201ENST00000516338 101 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 RN7SL356P-201ENST00000582228 248 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 AC024153.1-201ENST00000603103 365 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 AL133481.2-203ENST00000607558 139 ntBASIC5.47□□□□□ -1.53
HLA-CQ95604 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-CQ95604 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.47□□□□□ -1.53
HLA-CQ95604 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-CQ95604 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HLA-CQ95604 AL109809.4-201ENST00000603520 2185 ntBASIC5.46□□□□□ -1.53
HLA-CQ95604 AC093535.2-201ENST00000624769 2326 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-CQ95604 Y_RNA.273-201ENST00000364703 102 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 Y_RNA.331-201ENST00000365267 102 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RNU6-1130P-201ENST00000365434 107 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RNU6-142P-201ENST00000384019 107 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RPL11P3-201ENST00000395256 523 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RPL23AP17-201ENST00000401064 499 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 TBCAP2-201ENST00000416175 326 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 MRPS21P2-201ENST00000424704 264 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RPS29P10-201ENST00000439197 166 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 RPL34P20-201ENST00000442771 351 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-CQ95604 RN7SL319P-201ENST00000480656 221 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 AL132838.2-201ENST00000492041 314 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 AF186996.7-201ENST00000492781 209 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AC137627.1-201ENST00000545761 289 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-CQ95604 RPL21P9-201ENST00000556149 474 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-CQ95604 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 AL138963.2-201ENST00000605137 226 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 AC004656.1-201ENST00000568479 4951 ntBASIC5.46□□□□□ -1.54
HLA-CQ95604 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-CQ95604 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HLA-CQ95604 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-CQ95604 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HLA-CQ95604 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HLA-CQ95604 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 AC004925.1-201ENST00000624256 2706 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 RNU6-653P-201ENST00000363074 106 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 SNORD1C-201ENST00000363315 78 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 Y_RNA.319-201ENST00000365138 92 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.45□□□□□ -1.54
HLA-CQ95604 SNORA70H-201ENST00000383910 135 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 SNORA70J-201ENST00000384182 135 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 RNU6-281P-201ENST00000384212 103 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 RNU6-1145P-201ENST00000384246 107 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 Y_RNA.571-201ENST00000384753 98 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 MIR10B-201ENST00000385011 110 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 RNU2-68P-201ENST00000410878 191 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 CYP4F29P-201ENST00000420685 446 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-CQ95604 RPL21P129-201ENST00000491732 478 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 RNU6-1256P-201ENST00000516539 103 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-CQ95604 RNA5SP108-201ENST00000605921 117 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.45□□□□□ -1.54
HLA-CQ95604 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
HLA-CQ95604 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 AC025031.4-201ENST00000621248 3271 ntBASIC5.45□□□□□ -1.54
HLA-CQ95604 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HLA-CQ95604 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms