Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC112484.5-201ENST00000624189 228 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 AL669831.3-213ENST00000636676 183 ntBASIC4.64□□□□□ -1.67
BRF1Q92994 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRF1Q92994 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BRF1Q92994 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
BRF1Q92994 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
BRF1Q92994 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.63□□□□□ -1.67
BRF1Q92994 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 KPNA2P1-201ENST00000458289 1591 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 RNU6-1040P-201ENST00000383974 107 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 RNU6-1105P-201ENST00000384774 107 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 RNU6-882P-201ENST00000391025 103 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 CISD1P1-201ENST00000393907 327 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 Y_RNA.646-201ENST00000410980 101 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC018865.2-201ENST00000423631 129 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.63□□□□□ -1.67
BRF1Q92994 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.63□□□□□ -1.67
BRF1Q92994 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.63□□□□□ -1.67
BRF1Q92994 AC069499.1-201ENST00000489433 509 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC097473.1-201ENST00000508142 408 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.63□□□□□ -1.67
BRF1Q92994 TBCAP3-201ENST00000512475 312 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 SNORA31.22-201ENST00000517204 135 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.63□□□□□ -1.67
BRF1Q92994 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.63□□□□□ -1.67
BRF1Q92994 BNIP3P5-201ENST00000562290 498 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.63□□□□□ -1.67
BRF1Q92994 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.63□□□□□ -1.67
BRF1Q92994 AC007938.3-201ENST00000604965 623 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC023043.4-201ENST00000612081 449 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.63□□□□□ -1.67
BRF1Q92994 AC091925.1-201ENST00000623204 462 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AC067931.1-201ENST00000624190 671 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 UBE3AP2-201ENST00000429033 2259 ntBASIC4.63□□□□□ -1.67
BRF1Q92994 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.63□□□□□ -1.67
BRF1Q92994 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRF1Q92994 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRF1Q92994 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
BRF1Q92994 IPO8P1-201ENST00000455509 3109 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
BRF1Q92994 MIR372-201ENST00000362225 67 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 Y_RNA.5-201ENST00000362334 102 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 RNU6-1115P-201ENST00000362490 106 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 RNU1-13P-201ENST00000384499 162 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 AC092809.3-201ENST00000415453 231 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AC113618.1-201ENST00000416747 285 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 RSL24D1P6-201ENST00000426934 401 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 OR4C10P-201ENST00000434991 931 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.62□□□□□ -1.67
BRF1Q92994 AL035666.1-201ENST00000446195 348 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 RNU6-953P-201ENST00000459154 107 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AC117503.1-201ENST00000472241 394 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.62□□□□□ -1.67
BRF1Q92994 RN7SKP295-201ENST00000517264 153 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AC009902.1-201ENST00000519351 183 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 AL121603.1-201ENST00000553815 142 ntBASIC4.62□□□□□ -1.67
BRF1Q92994 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.62□□□□□ -1.67
BRF1Q92994 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.62□□□□□ -1.67
BRF1Q92994 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.62□□□□□ -1.67
BRF1Q92994 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BRF1Q92994 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRF1Q92994 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRF1Q92994 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
BRF1Q92994 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF1Q92994 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 Y_RNA.148-201ENST00000363557 117 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 RNU6-76P-201ENST00000384060 104 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 MIR708-201ENST00000390708 88 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AL356535.1-201ENST00000440335 398 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 IPO7P1-201ENST00000442031 636 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 TPT1P12-201ENST00000448968 492 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AL135752.1-201ENST00000479477 471 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.61□□□□□ -1.67
BRF1Q92994 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
BRF1Q92994 PTP4A1P4-201ENST00000512479 322 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AL355836.1-201ENST00000555951 870 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.61□□□□□ -1.67
BRF1Q92994 MIR6128-201ENST00000615528 109 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 ATP5A1P2-202ENST00000616464 443 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AC010205.1-201ENST00000616668 449 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 7SK.10-201ENST00000621414 298 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 AL353748.2-201ENST00000622148 471 ntBASIC4.61□□□□□ -1.67
BRF1Q92994 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BRF1Q92994 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF1Q92994 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF1Q92994 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF1Q92994 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF1Q92994 AP001486.2-201ENST00000561652 5113 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms