Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC008133.2-201ENST00000624540 351 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 ZNF519P1-201ENST00000449011 1626 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 Y_RNA.433-201ENST00000384089 102 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC016769.3-201ENST00000396562 315 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC234781.2-201ENST00000426370 994 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 TPTE2P1-204ENST00000435256 593 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 PGBD4P3-201ENST00000440731 581 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 MTND2P19-201ENST00000449129 1012 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC234775.1-201ENST00000454247 670 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 BX248409.1-201ENST00000455497 255 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 MTND3P24-201ENST00000506306 329 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 Y_RNA.681-201ENST00000516445 113 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC118942.1-201ENST00000529674 1035 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 CR383656.8-201ENST00000549046 145 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.91□□□□□ -2.1
TOPBP1Q92547 AC040168.1-201ENST00000623594 991 ntBASIC1.91□□□□□ -2.1
TOPBP1Q92547 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.1
TOPBP1Q92547 AL354685.2-201ENST00000448218 1447 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 Z75741.2-201ENST00000417272 1167 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 VN1R108P-201ENST00000431580 830 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 AL589880.1-201ENST00000448271 287 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 BZW1P2-201ENST00000473537 826 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 VPS26AP1-201ENST00000483197 979 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 AC022493.1-201ENST00000492984 337 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 LSM6P2-201ENST00000552208 177 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 VN1R88P-201ENST00000596787 292 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 AL355802.4-201ENST00000607635 548 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 FRG1HP-204ENST00000617940 757 ntBASIC1.9□□□□□ -2.11
TOPBP1Q92547 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.9□□□□□ -2.11
TOPBP1Q92547 Y_RNA.458-201ENST00000384240 102 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 IPO7P1-201ENST00000442031 636 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.89□□□□□ -2.11
TOPBP1Q92547 NAP1L1P3-201ENST00000462291 880 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TOPBP1Q92547 SNORA70.16-201ENST00000516390 95 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.89□□□□□ -2.11
TOPBP1Q92547 AC012414.2-201ENST00000559474 187 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 AC095057.3-201ENST00000567102 1157 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 AC079597.1-201ENST00000624306 508 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.89□□□□□ -2.11
TOPBP1Q92547 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.89□□□□□ -2.11
TOPBP1Q92547 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.89□□□□□ -2.11
TOPBP1Q92547 AC007342.9-201ENST00000623877 1385 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 SNORD115-48-201ENST00000364764 76 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 RNA5SP354-201ENST00000391247 136 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 RNU6-77P-201ENST00000410554 91 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 AL356320.2-201ENST00000417263 507 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.88□□□□□ -2.11
TOPBP1Q92547 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.88□□□□□ -2.11
TOPBP1Q92547 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.88□□□□□ -2.11
TOPBP1Q92547 OR5BM1P-201ENST00000512021 366 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.88□□□□□ -2.11
TOPBP1Q92547 VN1R107P-201ENST00000601784 209 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 AP002826.1-201ENST00000608835 315 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.88□□□□□ -2.11
TOPBP1Q92547 MIR1264-201ENST00000616374 69 ntBASIC1.88□□□□□ -2.11
TOPBP1Q92547 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.87□□□□□ -2.11
TOPBP1Q92547 RNU6-921P-201ENST00000384361 107 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 MIR524-201ENST00000385242 87 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 RNU6-516P-201ENST00000411381 104 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 MTND4P24-201ENST00000424002 397 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.87□□□□□ -2.11
TOPBP1Q92547 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.87□□□□□ -2.11
TOPBP1Q92547 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TOPBP1Q92547 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.87□□□□□ -2.11
TOPBP1Q92547 RNU6-1095P-201ENST00000516148 108 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 SNORA31.16-201ENST00000516773 139 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 EEF1B2P4-201ENST00000551398 348 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 SUB1P4-201ENST00000566062 339 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 MIR3122-201ENST00000577243 73 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.87□□□□□ -2.11
TOPBP1Q92547 AL136363.1-201ENST00000605349 337 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AL449363.1-201ENST00000617815 186 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AC006338.1-201ENST00000618453 749 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AC027309.3-201ENST00000623419 351 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 AC068700.1-201ENST00000565862 3754 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 DDX43P2-201ENST00000604753 1354 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 CENPCP1-201ENST00000533085 2578 ntBASIC1.87□□□□□ -2.11
TOPBP1Q92547 RNA5SP457-201ENST00000363657 124 ntBASIC1.86□□□□□ -2.11
TOPBP1Q92547 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TOPBP1Q92547 CYCSP33-201ENST00000414485 327 ntBASIC1.86□□□□□ -2.11
TOPBP1Q92547 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.86□□□□□ -2.11
TOPBP1Q92547 AL590623.1-201ENST00000427864 105 ntBASIC1.86□□□□□ -2.11
TOPBP1Q92547 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.86□□□□□ -2.11
TOPBP1Q92547 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TOPBP1Q92547 snoU13.28-201ENST00000459235 104 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms