Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC005539.1-201ENST00000443768 1479 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 MTND4P1-201ENST00000457501 1466 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 RNU6-343P-201ENST00000364709 104 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 SNORA40.2-201ENST00000390847 128 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 SNORA40.4-201ENST00000390971 128 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 SDCBPP1-201ENST00000440192 890 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC090096.1-201ENST00000489168 390 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 EIF4EP3-201ENST00000498782 656 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC147055.4-201ENST00000504399 745 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 MRPS36P2-201ENST00000512569 299 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 RNU6-583P-201ENST00000516012 92 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AL132857.1-201ENST00000555180 708 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC009127.3-201ENST00000570531 403 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 RPS3AP23-202ENST00000574601 686 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 ISCA1P3-201ENST00000577104 373 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 MIR5694-201ENST00000581190 76 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AP001429.1-201ENST00000602568 530 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 MIR8081-201ENST00000611533 95 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AL445264.1-201ENST00000621719 171 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC104985.3-201ENST00000623479 597 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AC131280.1-202ENST00000624067 4211 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 AL356473.1-201ENST00000406203 1408 ntBASIC1.81□□□□□ -2.12
LMX1AQ8TE12 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 RNA5SP37-201ENST00000365420 130 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 RNU6-359P-201ENST00000365466 108 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 SNORA6-201ENST00000384033 151 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 SNORA51.11-201ENST00000384442 131 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 MIR9-3-201ENST00000385084 90 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 CCDC58P2-201ENST00000417131 366 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 SEPT2P1-201ENST00000419651 180 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 MRPS36P1-201ENST00000421291 307 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC092047.1-201ENST00000424997 240 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AP000949.1-201ENST00000438328 629 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 ARPC3P5-201ENST00000448802 534 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC092155.2-201ENST00000454675 477 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 RNU7-26P-201ENST00000458980 63 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC016550.1-201ENST00000505348 785 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC093752.1-206ENST00000511823 336 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 SCARNA11.3-201ENST00000517276 130 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC023824.2-201ENST00000566185 400 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC104072.1-201ENST00000568817 668 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AL355877.2-201ENST00000603670 358 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 HMGB1P24-202ENST00000615653 685 ntBASIC1.8□□□□□ -2.12
LMX1AQ8TE12 AC007785.2-201ENST00000598627 1916 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 ADAM3A-203ENST00000461344 2157 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 RNU5A-1-201ENST00000362698 116 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 RNA5SP190-201ENST00000365222 118 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 MIR514A1-201ENST00000385133 98 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 RNU6-298P-201ENST00000390888 96 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 RNU4-72P-201ENST00000410754 173 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC018630.2-202ENST00000422992 927 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 MTND4P6-201ENST00000438297 472 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 THAP5P1-201ENST00000439089 262 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 PIGFP3-201ENST00000441918 722 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 IPO7P1-201ENST00000442031 636 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 RNU6-717P-201ENST00000459076 104 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC022634.1-201ENST00000520765 532 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC005832.3-201ENST00000537929 631 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC124947.2-202ENST00000552735 133 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 OR11H5P-201ENST00000554039 926 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC090615.1-201ENST00000577519 154 ntBASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.79□□□□□ -2.12
LMX1AQ8TE12 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms