Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC066616.2-201ENST00000559334 1481 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNA5SP72-201ENST00000364442 117 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNU6-996P-201ENST00000365438 107 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 SNORD15B-201ENST00000384714 146 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 MIR34B-201ENST00000385076 84 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 PTMAP5-201ENST00000393073 333 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AL356057.2-201ENST00000403318 432 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNA5SP239-201ENST00000410218 129 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNU2-15P-201ENST00000410692 191 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNU6-1148P-201ENST00000410992 104 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RPL35AP12-201ENST00000425362 338 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 FTH1P1-201ENST00000437933 532 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC007677.1-201ENST00000445757 515 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RNU7-63P-201ENST00000459054 62 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 RN7SL75P-201ENST00000461926 281 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 GMFBP1-201ENST00000467831 427 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 SNORA70.14-201ENST00000516205 110 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 HPRT1P3-201ENST00000539521 576 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC243972.3-201ENST00000539655 198 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC126177.8-201ENST00000618339 1015 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 AC002550.2-201ENST00000621246 394 ntBASIC3.31□□□□□ -1.88
LMO3Q8TAP4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LMO3Q8TAP4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RNU5A-8P-201ENST00000364102 114 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RNU4-48P-201ENST00000365559 182 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 Y_RNA.460-201ENST00000384255 102 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RNU6-39P-201ENST00000384344 107 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL122016.1-201ENST00000403365 367 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL162578.1-201ENST00000406202 378 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RNU2-62P-201ENST00000410868 191 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RPS15AP40-201ENST00000419621 391 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RPL23AP69-201ENST00000431134 458 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RAC1P7-201ENST00000445367 377 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC073415.1-201ENST00000449240 153 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL645939.1-201ENST00000453429 797 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 MTND1P9-201ENST00000453775 944 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL049714.1-201ENST00000466686 347 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 RN7SL807P-201ENST00000470923 297 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC078785.3-201ENST00000476607 425 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 HMGN1P13-201ENST00000505795 138 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC105029.1-201ENST00000520250 669 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC010928.3-201ENST00000587712 541 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC007318.2-201ENST00000620999 243 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC244100.1-202ENST00000621554 382 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC090574.1-201ENST00000623186 233 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC112204.3-201ENST00000623822 332 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC091925.2-201ENST00000625059 256 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AC100810.6-201ENST00000638068 285 ntBASIC3.3□□□□□ -1.88
LMO3Q8TAP4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
LMO3Q8TAP4 AL359893.1-201ENST00000447628 1580 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
LMO3Q8TAP4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LMO3Q8TAP4 EXOC5P1-201ENST00000510543 1969 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 MTND4P35-201ENST00000604257 1375 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO3Q8TAP4 RNU6-1279P-201ENST00000383917 103 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 RNU6-1227P-201ENST00000383981 107 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 SNORA70E-201ENST00000384492 135 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 RNU6-146P-201ENST00000384602 108 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 RNU6-510P-201ENST00000391239 108 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
LMO3Q8TAP4 AL353678.1-201ENST00000422735 741 ntBASIC3.29□□□□□ -1.88
LMO3Q8TAP4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.29□□□□□ -1.88
LMO3Q8TAP4 AC006946.1-201ENST00000429106 328 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms