Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNA5SP38-201ENST00000410750 119 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 RNU6-325P-201ENST00000411132 105 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 RPS29P9-201ENST00000440360 171 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC124916.1-201ENST00000444020 547 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 NUTF2P3-201ENST00000448540 384 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC013470.1-201ENST00000453438 462 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.639-201ENST00000458981 102 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 snoU13.28-201ENST00000459235 104 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC027575.1-201ENST00000481064 460 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC005741.1-201ENST00000511094 432 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC012400.1-201ENST00000518452 381 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 NRBF2P4-201ENST00000520874 850 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC010186.2-204ENST00000537668 439 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC009314.1-201ENST00000603871 304 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC018889.1-201ENST00000605372 397 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AL161616.1-201ENST00000611867 286 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 MIR6861-201ENST00000618657 64 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AC134503.1-201ENST00000633048 54 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 MIR1910-201ENST00000636955 80 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 U4.7-201ENST00000638126 106 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CLRN3Q8NCR9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RNU6-78P-201ENST00000362897 107 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RNA5SP510-201ENST00000364697 99 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.394-201ENST00000383942 103 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RNA5SP284-201ENST00000384547 118 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RNU6-310P-201ENST00000384655 107 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 MIR518D-201ENST00000385014 87 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 SNORA11.5-201ENST00000408163 128 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 MIR1282-201ENST00000408865 101 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RNU6-1304P-201ENST00000411374 106 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 SYF2P2-201ENST00000417620 583 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AL159169.1-201ENST00000421119 127 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC236972.1-201ENST00000433225 199 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 EEF1B2P6-201ENST00000445713 673 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 RPS23P6-201ENST00000466136 431 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC114801.2-201ENST00000503825 781 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AK3P2-201ENST00000507976 429 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC097473.1-201ENST00000508142 408 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC093303.1-201ENST00000514549 295 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 ACA59.1-201ENST00000515966 143 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 Y_RNA.670-201ENST00000516255 105 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC005363.1-201ENST00000530779 351 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AP000867.2-201ENST00000532468 320 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AL049872.1-201ENST00000556323 322 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC005899.2-201ENST00000584353 90 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 MTND4LP5-201ENST00000605152 292 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CLRN3Q8NCR9 AC109780.1-201ENST00000451768 1344 ntBASIC3.71□□□□□ -1.81
CLRN3Q8NCR9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CLRN3Q8NCR9 OR13C1P-202ENST00000641378 2919 ntBASIC3.71□□□□□ -1.81
CLRN3Q8NCR9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms