Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC022690.1-201ENST00000526681 550 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC091544.4-201ENST00000555268 342 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AC009063.1-201ENST00000563342 702 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.63□□□□□ -1.83
USP38Q8NB14 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC078795.2-201ENST00000602835 1252 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 NRBF2P5-201ENST00000603087 788 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL136363.2-201ENST00000604173 851 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AC005332.10-201ENST00000612725 619 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL157817.1-201ENST00000614264 790 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 AL359693.1-201ENST00000614959 2407 ntBASIC3.63□□□□□ -1.83
USP38Q8NB14 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.63□□□□□ -1.83
USP38Q8NB14 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP38Q8NB14 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
USP38Q8NB14 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.63□□□□□ -1.83
USP38Q8NB14 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP38Q8NB14 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
USP38Q8NB14 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
USP38Q8NB14 RNU6-188P-201ENST00000364207 107 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 MIR325-201ENST00000385260 98 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 FAT1P1-201ENST00000406588 507 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 PIGFP2-201ENST00000421400 651 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 RPL23AP69-201ENST00000431134 458 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 NDUFB4P6-201ENST00000436819 366 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 RPL23AP22-201ENST00000437556 453 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC079448.1-201ENST00000449377 373 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.62□□□□□ -1.83
USP38Q8NB14 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 TPTE2P5-203ENST00000458118 728 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC105252.1-201ENST00000503089 286 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.62□□□□□ -1.83
USP38Q8NB14 MTND4LP22-201ENST00000508209 276 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 MTCO2P4-201ENST00000517968 247 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC015917.1-201ENST00000579654 510 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.62□□□□□ -1.83
USP38Q8NB14 AC068790.2-201ENST00000602601 557 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AL162713.1-201ENST00000604480 262 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 Z84480.1-201ENST00000605131 311 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 NDUFA8P1-201ENST00000605525 367 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC008962.1-201ENST00000605729 304 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 AC090132.2-201ENST00000615881 347 ntBASIC3.62□□□□□ -1.83
USP38Q8NB14 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP38Q8NB14 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP38Q8NB14 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
USP38Q8NB14 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
USP38Q8NB14 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP38Q8NB14 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
USP38Q8NB14 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
USP38Q8NB14 RNU6-641P-201ENST00000384006 107 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL513331.1-201ENST00000411908 397 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.61□□□□□ -1.83
USP38Q8NB14 NDUFB4P7-201ENST00000423198 363 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.61□□□□□ -1.83
USP38Q8NB14 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.61□□□□□ -1.83
USP38Q8NB14 RPS24P1-201ENST00000438550 371 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC010095.1-201ENST00000443543 144 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC009237.8-201ENST00000445492 379 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC020550.1-201ENST00000447385 163 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC125238.1-201ENST00000448842 249 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 C1DP4-201ENST00000455429 424 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL359385.1-201ENST00000456509 365 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.61□□□□□ -1.83
USP38Q8NB14 Y_RNA.673-201ENST00000516306 88 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 SNORA64.4-201ENST00000516632 81 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.61□□□□□ -1.83
USP38Q8NB14 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.61□□□□□ -1.83
USP38Q8NB14 GLUD1P4-201ENST00000590914 418 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.6-201ENST00000603753 252 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.11-201ENST00000604059 253 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC013553.2-201ENST00000604244 589 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC008162.1-201ENST00000604718 254 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.1-201ENST00000604752 252 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.5-201ENST00000605253 252 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.12-201ENST00000605291 253 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.8-201ENST00000605353 252 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AL670379.7-201ENST00000605823 252 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 SNORD39.4-201ENST00000620099 78 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 AC138649.3-201ENST00000622154 254 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 MIR7843-201ENST00000622274 79 ntBASIC3.61□□□□□ -1.83
USP38Q8NB14 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP38Q8NB14 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms