Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AP001350.1-201ENST00000601906 1524 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC004925.1-201ENST00000624256 2706 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RNA5SP167-201ENST00000365461 116 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RNU6-1074P-201ENST00000383995 104 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 SNORA32.2-201ENST00000384049 122 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 SNORA24.1-201ENST00000384401 135 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 Y_RNA.529-201ENST00000384586 119 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RNU2-43P-201ENST00000410306 190 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC126124.2-201ENST00000413542 321 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC007390.1-201ENST00000415722 356 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RPL7P12-201ENST00000446719 750 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AL118520.1-201ENST00000450770 291 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RPL9P32-201ENST00000464118 620 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC010631.1-201ENST00000474150 156 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RPS27AP1-201ENST00000475545 471 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RPL23AP55-201ENST00000498163 452 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC010265.1-201ENST00000513509 211 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC022690.1-201ENST00000526681 550 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 RPS3AP23-202ENST00000574601 686 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC024619.4-201ENST00000580924 316 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AL356055.1-201ENST00000602528 446 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC013553.2-201ENST00000604244 589 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC011155.2-201ENST00000623202 216 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC110801.1-201ENST00000623590 212 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC090617.10-201ENST00000624308 134 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AP001148.1-201ENST00000624124 2359 ntBASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.25□□□□□ -1.89
CLIP4Q8N3C7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 TAB3P1-202ENST00000452645 1634 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 FRG1CP-201ENST00000358464 769 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 SNORA31-201ENST00000362607 130 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU6-552P-201ENST00000362869 119 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU4-73P-201ENST00000363164 141 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 SNORA23-201ENST00000365128 182 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 SNORD81.2-201ENST00000365153 76 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU4-66P-201ENST00000365199 138 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 MIR607-201ENST00000385241 96 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL606923.1-201ENST00000406616 190 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU2-29P-201ENST00000410423 189 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU6-193P-201ENST00000410977 107 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC009161.1-201ENST00000417306 376 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 PDCL2P1-201ENST00000419302 352 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL035423.1-201ENST00000420331 213 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RPL21P112-201ENST00000434403 463 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RPL36AP6-201ENST00000435770 321 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC090774.1-201ENST00000435925 246 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC009969.1-201ENST00000438726 172 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL121871.1-201ENST00000443413 436 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL359073.1-201ENST00000448036 403 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AL162395.1-201ENST00000457882 422 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RN7SL594P-201ENST00000470590 287 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RPL21P99-201ENST00000480369 423 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RPL31P13-201ENST00000484151 370 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC023141.12-201ENST00000512399 199 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 RNU6-390P-201ENST00000516259 103 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 BTF3P12-201ENST00000519620 469 ntBASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.24□□□□□ -1.89
CLIP4Q8N3C7 BNIP3P6-201ENST00000549284 499 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms