| HOOK3 | Q86VS8 | MIR3670-3-201 | ENST00000584855 | 65 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC121334.2-201 | ENST00000605387 | 271 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | MIR3670-4-201 | ENST00000612260 | 65 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL445584.2-201 | ENST00000614030 | 616 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC244093.3-201 | ENST00000615419 | 411 nt | TSL 3 BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | FO624990.1-201 | ENST00000636373 | 85 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC010149.2-201 | ENST00000637608 | 315 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | OFD1P6Y-202 | ENST00000451061 | 2724 nt | BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CHD1-201 | ENST00000284049 | 6457 nt | APPRIS P1 TSL 1 (best) BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | SNHG14-215 | ENST00000551631 | 4008 nt | TSL 5 BASIC | 2.92 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | HMGB1-201 | ENST00000326004 | 821 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | RNU6-533P-201 | ENST00000384144 | 107 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CD3D-202 | ENST00000392884 | 476 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL139095.1-201 | ENST00000404326 | 391 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC007463.1-201 | ENST00000416534 | 734 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | MTND4P20-201 | ENST00000424125 | 869 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | ISCA1P1-201 | ENST00000426679 | 387 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | HMGB1P27-201 | ENST00000431429 | 603 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL080284.1-201 | ENST00000434493 | 442 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | RPS20P5-201 | ENST00000434808 | 360 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | UBE2D3P1-201 | ENST00000436669 | 444 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL513043.1-201 | ENST00000439124 | 535 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL592182.1-201 | ENST00000440897 | 250 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | RPS15AP27-201 | ENST00000449183 | 343 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | ZNF114P1-201 | ENST00000453500 | 292 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | FABP5P15-201 | ENST00000453566 | 214 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AP000705.1-201 | ENST00000454567 | 350 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | RBM43P1-201 | ENST00000476891 | 1081 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | RPL31P41-201 | ENST00000477967 | 372 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC117522.3-201 | ENST00000507974 | 584 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC097478.1-204 | ENST00000509723 | 547 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC113155.1-201 | ENST00000511141 | 769 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | VTRNA2-2P-201 | ENST00000516091 | 103 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | SNORA31.15-201 | ENST00000516771 | 132 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC025881.1-201 | ENST00000518851 | 512 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CCDC7-208 | ENST00000537047 | 657 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CCDC7-209 | ENST00000539197 | 581 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | LINC02350-201 | ENST00000544419 | 480 nt | TSL 3 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC008015.1-201 | ENST00000555505 | 465 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL049775.2-201 | ENST00000557547 | 558 nt | TSL 4 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AP001981.2-201 | ENST00000603241 | 418 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AL137843.1-201 | ENST00000605078 | 385 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC107294.1-201 | ENST00000609524 | 467 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC104010.1-201 | ENST00000616889 | 150 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CNOT1-223 | ENST00000628857 | 291 nt | TSL 5 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | U2.21-201 | ENST00000637295 | 81 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | ADGRG7-202 | ENST00000475887 | 2035 nt | TSL 2 BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | AC092104.1-201 | ENST00000497346 | 1441 nt | BASIC | 2.91 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | TSGA10-205 | ENST00000410001 | 3036 nt | APPRIS P2 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | P2RY12-201 | ENST00000302632 | 1766 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | CATSPERB-201 | ENST00000256343 | 3623 nt | APPRIS P2 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.94 | | |
| HOOK3 | Q86VS8 | UBE2L2-201 | ENST00000254302 | 429 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU6-7-201 | ENST00000364784 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU6-8-201 | ENST00000365467 | 107 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | PPP1R1C-203 | ENST00000409702 | 1157 nt | APPRIS P1 TSL 1 (best) BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC073311.1-201 | ENST00000420146 | 505 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | B3GALNT1P1-201 | ENST00000420569 | 975 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC104651.1-201 | ENST00000427559 | 735 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | MTND5P25-201 | ENST00000430499 | 799 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RPS15AP5-201 | ENST00000436276 | 388 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AL589684.1-201 | ENST00000445974 | 507 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | ST13P20-201 | ENST00000447996 | 1065 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC005538.1-201 | ENST00000455991 | 594 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | SNORD97-201 | ENST00000459187 | 142 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC108067.1-201 | ENST00000514304 | 215 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | Y_RNA.717-201 | ENST00000517106 | 92 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC107934.1-201 | ENST00000522215 | 217 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | LINC02253-201 | ENST00000559321 | 448 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC106796.1-201 | ENST00000577173 | 615 nt | TSL 3 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RPL12P50-201 | ENST00000603116 | 116 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AL355877.2-201 | ENST00000603670 | 358 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AL360219.1-201 | ENST00000610230 | 366 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC025594.3-201 | ENST00000613068 | 790 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | ATP5A1P2-202 | ENST00000616464 | 443 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC079248.2-201 | ENST00000623779 | 326 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | CR381653.2-201 | ENST00000624041 | 768 nt | BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | SLC25A46-206 | ENST00000509432 | 1596 nt | TSL 2 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.9 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | LTN1-201 | ENST00000361371 | 7685 nt | APPRIS P1 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC092593.1-201 | ENST00000515413 | 1815 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU6-511P-201 | ENST00000363496 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNY4P16-201 | ENST00000364768 | 94 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | LUZP4-201 | ENST00000371920 | 1701 nt | APPRIS P2 TSL 1 (best) BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AP003170.3-201 | ENST00000399123 | 158 nt | TSL 5 BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | UBA52P6-201 | ENST00000399822 | 382 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AL021407.1-201 | ENST00000404531 | 386 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | PPP3R1-202 | ENST00000409377 | 684 nt | TSL 3 BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | RNU2-68P-201 | ENST00000410878 | 191 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC023141.4-201 | ENST00000412031 | 328 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | NDUFS5P4-201 | ENST00000412983 | 318 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC005005.2-201 | ENST00000420779 | 380 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | AC006366.1-201 | ENST00000422002 | 759 nt | BASIC | 2.89 | □□□□□ -1.95 | | |
| HOOK3 | Q86VS8 | ABCC5-AS1-201 | ENST00000422946 | 469 nt | TSL 2 BASIC | 2.89 | □□□□□ -1.95 | | |