Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-19P-201ENST00000384718 107 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 ATP5F1P3-201ENST00000397213 657 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RNU2-36P-201ENST00000410361 191 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RPS12P24-201ENST00000412619 387 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL008987.1-201ENST00000415528 237 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL158156.1-201ENST00000422509 473 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL022400.1-201ENST00000423946 935 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 BX276092.3-201ENST00000424182 230 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RPS3AP44-201ENST00000425466 790 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RPL21P133-201ENST00000443666 476 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 VN1R34P-201ENST00000447387 883 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 ST13P20-201ENST00000447996 1065 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC008526.1-201ENST00000509149 338 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 CBX3P7-201ENST00000532876 502 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 ELOCP31-201ENST00000540463 467 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC112187.2-201ENST00000604345 283 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AP000860.1-201ENST00000605250 559 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC107952.2-201ENST00000606048 486 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC103710.2-201ENST00000609912 942 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC090970.3-201ENST00000612566 866 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL162274.2-201ENST00000614406 332 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 uc_338.12-201ENST00000616344 181 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL449363.1-201ENST00000617815 186 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC009159.1-201ENST00000618386 642 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC012640.5-201ENST00000623897 319 ntBASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.89□□□□□ -2.11
MRPL55Q7Z7F7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC073325.2-201ENST00000339545 159 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 SNORA63.1-201ENST00000362493 131 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RNY4P24-201ENST00000362735 96 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 SNORA71.1-201ENST00000364523 117 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 SNORA9.2-201ENST00000365361 133 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-1200P-201ENST00000384162 107 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 Y_RNA.534-201ENST00000384599 112 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 FCF1P10-201ENST00000407590 479 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RNA5SP120-201ENST00000410900 112 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 USP9YP6-201ENST00000413550 854 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 MORF4L1P6-201ENST00000418771 268 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RAC1P6-201ENST00000423911 575 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC007560.1-201ENST00000426912 237 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC022018.1-201ENST00000430685 241 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 HMGB3P12-201ENST00000438745 556 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 GDI2P2-201ENST00000445131 608 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RN7SL807P-201ENST00000470923 297 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 MTND1P3-201ENST00000484956 952 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC018714.1-201ENST00000605028 208 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC107214.2-201ENST00000608204 634 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC011890.2-201ENST00000613393 294 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC007318.2-201ENST00000620999 243 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 AC010338.1-201ENST00000621823 717 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 Z99571.1-201ENST00000636677 394 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 MTND5P42-201ENST00000637720 498 ntBASIC1.88□□□□□ -2.11
MRPL55Q7Z7F7 RNU6-288P-201ENST00000363690 104 ntBASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 SNORA38.1-201ENST00000364172 131 ntBASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 RNA5SP267-201ENST00000364893 126 ntBASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 MIR518D-201ENST00000385014 87 ntBASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 MIR147B-201ENST00000390185 80 ntBASIC1.87□□□□□ -2.11
MRPL55Q7Z7F7 U8.14-201ENST00000390843 143 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms