Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIR6875-201ENST00000617506 72 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AP003355.3-201ENST00000623465 114 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC103710.2-202ENST00000641454 2853 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 MTND5P27-201ENST00000428871 1720 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 ASNSP3-201ENST00000451989 1306 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 NACAP2-201ENST00000318548 624 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RNU6-50P-201ENST00000362356 103 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 MIR493-201ENST00000385254 89 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RPL32P23-201ENST00000397237 405 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 U3.42-201ENST00000408746 214 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 YPEL5P1-201ENST00000419731 367 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 RPL7P46-201ENST00000425129 740 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 C4BPAP2-201ENST00000428434 478 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RPL36AP53-201ENST00000432891 316 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 CBWD4P-201ENST00000445695 655 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 VN1R34P-201ENST00000447387 883 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 PRDX3P3-201ENST00000447765 522 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RPL7P5-201ENST00000471472 736 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 TTC39CP1-201ENST00000512513 755 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 SNORD60.2-201ENST00000516883 86 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 RNA5SP471-201ENST00000516971 106 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 OR8R1P-201ENST00000543943 764 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC015917.1-201ENST00000579654 510 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC010525.2-201ENST00000590920 195 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 NRBF2P5-201ENST00000603087 788 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AL158032.1-201ENST00000605401 106 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AC022893.3-201ENST00000607665 437 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 AL355073.2-201ENST00000612106 557 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 ZYXP1-201ENST00000617638 118 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 uc_338.11-201ENST00000619132 160 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
SHFQ7M4L6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
SHFQ7M4L6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHFQ7M4L6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHFQ7M4L6 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC005183.1-201ENST00000603687 1979 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHFQ7M4L6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 SNORA73.2-201ENST00000364946 201 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU4-20P-201ENST00000365601 151 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 RN7SKP156-201ENST00000410308 342 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU6-193P-201ENST00000410977 107 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RPS12P24-201ENST00000412619 387 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 BX323014.1-201ENST00000412876 237 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 OR6C66P-201ENST00000414917 930 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 AL356867.1-201ENST00000429623 299 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 HMGB1P27-201ENST00000431429 603 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 ATP5JP1-201ENST00000431631 322 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AL357552.1-201ENST00000445254 415 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 TPT1P12-201ENST00000448968 492 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 HMGN2P16-201ENST00000456802 261 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU6-953P-201ENST00000459154 107 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNU7-180P-201ENST00000459240 63 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RN7SL594P-201ENST00000470590 287 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 MTCO3P9-201ENST00000506989 781 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 HMGB3P15-201ENST00000507326 574 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 RNA5SP380-201ENST00000517190 98 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RANP9-201ENST00000519957 271 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AF235103.2-201ENST00000525753 346 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 RANP3-201ENST00000530970 276 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 ADI1P3-201ENST00000549509 470 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
SHFQ7M4L6 MIR4424-201ENST00000585257 86 ntBASIC3.16□□□□□ -1.9
SHFQ7M4L6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms