Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL138713.1-201ENST00000624026 2130 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 SNRPEP7-201ENST00000438350 220 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC007115.1-201ENST00000546853 234 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 ZNF663P-202ENST00000641770 1131 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AL354685.2-201ENST00000448218 1447 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 RNU1-96P-201ENST00000364163 162 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 MIR496-201ENST00000385226 102 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC008962.1-201ENST00000605729 304 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AC110792.3-201ENST00000595906 1614 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 RNU6-160P-201ENST00000384591 107 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AL357078.2-201ENST00000416486 427 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 ZNF90P2-204ENST00000419323 1075 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AL512661.1-201ENST00000434586 1253 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 OR4V1P-201ENST00000525394 1140 ntBASIC0.51□□□□□ -2.33
UBR4Q5T4S7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.51□□□□□ -2.33
UBR4Q5T4S7 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 SNORD114-31-201ENST00000363219 75 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 MTND5P17-201ENST00000418405 1603 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 IFNA20P-201ENST00000436840 528 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 NDUFB4P9-201ENST00000511646 388 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AP003355.1-201ENST00000518956 587 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC104997.1-201ENST00000519761 717 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 MIR4441-201ENST00000582623 100 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC074140.1-201ENST00000621617 208 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 MFSD8-213ENST00000641134 1327 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 Y_RNA.498-201ENST00000384460 102 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 RNU6-370P-201ENST00000411008 104 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 RNU6-138P-201ENST00000515952 107 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC004817.2-201ENST00000561794 651 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 MIR5694-201ENST00000581190 76 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC002545.1-201ENST00000592511 181 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC008121.1-201ENST00000603244 268 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC087468.1-201ENST00000604365 630 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 VTRNA1-1-201ENST00000363120 99 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC067940.1-201ENST00000458411 300 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC098799.2-201ENST00000509466 868 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AL512430.2-201ENST00000406786 339 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 Y_RNA.674-201ENST00000516362 113 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AC027335.2-201ENST00000624030 375 ntBASIC0.5□□□□□ -2.33
UBR4Q5T4S7 AL596211.1-201ENST00000569873 2277 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC007098.1-201ENST00000420122 367 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AP1S2P1-201ENST00000457344 379 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 MIR4446-201ENST00000578505 67 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC012531.5-201ENST00000611375 151 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 RN7SL660P-201ENST00000614852 299 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 Y_RNA.616-201ENST00000410835 95 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.49□□□□□ -2.33
UBR4Q5T4S7 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.49□□□□□ -2.33
UBR4Q5T4S7 RNA5SP364-201ENST00000516938 78 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 MIR4698-201ENST00000577795 80 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
UBR4Q5T4S7 SNORA7.2-201ENST00000364446 145 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 CYCSP26-201ENST00000534107 320 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AL096701.2-201ENST00000416920 238 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 RPL22P18-201ENST00000417197 377 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC0.49□□□□□ -2.33
UBR4Q5T4S7 AC089999.1-201ENST00000460336 374 ntBASIC0.49□□□□□ -2.33
UBR4Q5T4S7 MIR1285-2-201ENST00000408311 88 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 VN1R42P-201ENST00000424651 344 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 IGKV1-22-201ENST00000524313 326 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 CYP4A27P-201ENST00000567218 190 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC0.48□□□□□ -2.33
UBR4Q5T4S7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
UBR4Q5T4S7 RNA5SP498-201ENST00000411342 120 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 MTCO2P9-201ENST00000503214 694 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 AC112206.3-201ENST00000514578 389 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 RNA5SP461-201ENST00000516451 104 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 AC023934.1-201ENST00000574529 2389 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 RNU1-58P-201ENST00000362413 163 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 RNU6-833P-201ENST00000363486 107 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 RN7SKP51-201ENST00000410781 304 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.48□□□□□ -2.33
UBR4Q5T4S7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.48□□□□□ -2.33
UBR4Q5T4S7 Y_RNA.711-201ENST00000516993 102 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 SNORA31.26-201ENST00000517250 137 ntBASIC0.48□□□□□ -2.33
UBR4Q5T4S7 SNORD114-21-201ENST00000606412 72 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms