Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDCA8Q53HL2 RLIMP1-201ENST00000339626 1680 ntBASIC5.69□□□□□ -1.5
CDCA8Q53HL2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 MTND5P30-201ENST00000452896 1731 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 RNA5SP515-201ENST00000364570 118 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 RNU6-890P-201ENST00000384121 107 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AL513331.1-201ENST00000411908 397 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 Z99755.1-201ENST00000414048 380 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AC104472.2-201ENST00000469035 601 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 RPL23AP2-201ENST00000471227 466 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 RNU6-914P-201ENST00000516749 109 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 RNU7-143P-201ENST00000516781 65 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 IGLV3-26-201ENST00000520756 302 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AC087369.1-201ENST00000520775 996 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 MTND6P33-201ENST00000571794 183 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AC006065.5-201ENST00000623427 349 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 AL133412.1-201ENST00000380194 2992 ntBASIC5.68□□□□□ -1.5
CDCA8Q53HL2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDCA8Q53HL2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU1-108P-201ENST00000362556 161 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU6-288P-201ENST00000363690 104 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU6-196P-201ENST00000384315 107 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 SNORA57.1-201ENST00000391227 145 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AL356057.3-201ENST00000402607 340 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RPL21P65-201ENST00000406094 466 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RPS4XP7-201ENST00000406274 780 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 Y_RNA.594-201ENST00000410373 140 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AL117339.2-201ENST00000430475 180 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RN7SL585P-201ENST00000470538 280 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC022795.1-201ENST00000473808 480 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 HSPE1P6-201ENST00000479457 291 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC006517.1-201ENST00000480485 328 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC110792.1-201ENST00000491826 472 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 Y_RNA.670-201ENST00000516255 105 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU6-307P-201ENST00000516743 106 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU6-1137P-201ENST00000517073 99 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 RNU6-1213P-201ENST00000517075 94 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 MIR4680-201ENST00000580906 66 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC005899.2-201ENST00000584353 90 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC009229.3-201ENST00000608056 282 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 AC011890.2-201ENST00000613393 294 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 MIR6715B-201ENST00000637172 77 ntBASIC5.67□□□□□ -1.5
CDCA8Q53HL2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDCA8Q53HL2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 Y_RNA.80-201ENST00000362996 102 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 RNU6-1074P-201ENST00000383995 104 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 MIR1193-201ENST00000408109 78 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 AL358472.1-201ENST00000431295 329 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 NOTCH2P1-201ENST00000443481 624 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 BTF3P15-201ENST00000455606 336 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 MIR2053-201ENST00000459295 91 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 AC009901.1-201ENST00000506703 541 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 RPL23AP87-202ENST00000573039 466 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 AC025627.2-201ENST00000576220 160 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 SNX18P1Y-201ENST00000616231 511 ntBASIC5.66□□□□□ -1.5
CDCA8Q53HL2 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.66□□□□□ -1.5
CDCA8Q53HL2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CDCA8Q53HL2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CDCA8Q53HL2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDCA8Q53HL2 RNU6-266P-201ENST00000364225 107 ntBASIC5.65□□□□□ -1.5
CDCA8Q53HL2 RNU6-1106P-201ENST00000390845 107 ntBASIC5.65□□□□□ -1.5
CDCA8Q53HL2 RNU6-628P-201ENST00000410675 107 ntBASIC5.65□□□□□ -1.5
CDCA8Q53HL2 RNU4-6P-201ENST00000410804 122 ntBASIC5.65□□□□□ -1.5
CDCA8Q53HL2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.65□□□□□ -1.5
CDCA8Q53HL2 AL590632.1-201ENST00000424289 371 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms