Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC022968.1-201ENST00000567372 442 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 MIR5047-201ENST00000579212 100 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC015917.1-201ENST00000579654 510 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC010591.1-201ENST00000603941 649 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC103710.3-201ENST00000608157 948 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC025034.2-201ENST00000623264 286 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC100810.6-201ENST00000638068 285 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 AC006020.1-201ENST00000420179 1854 ntBASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A4Q53GD3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 RNU4-79P-201ENST00000362764 141 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 RNU6-179P-201ENST00000363350 107 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 RNU6-946P-201ENST00000383878 107 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 RNU6-332P-201ENST00000391193 108 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL356432.1-201ENST00000405809 419 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC092436.1-201ENST00000506450 503 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 MTCO3P9-201ENST00000506989 781 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC117522.3-201ENST00000507974 584 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC108078.2-201ENST00000510750 236 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP309-201ENST00000516670 106 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC243972.3-201ENST00000539655 198 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC078814.3-201ENST00000553036 491 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 MIR3186-201ENST00000577404 85 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 MIR4775-201ENST00000581168 75 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.6-201ENST00000603753 252 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.11-201ENST00000604059 253 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AC008162.1-201ENST00000604718 254 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.1-201ENST00000604752 252 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.5-201ENST00000605253 252 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.12-201ENST00000605291 253 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.8-201ENST00000605353 252 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL670379.7-201ENST00000605823 252 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL050343.2-201ENST00000607338 280 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 AL132765.2-201ENST00000610812 351 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 C2orf27A-204ENST00000623058 969 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 USP8P1-201ENST00000494673 3183 ntBASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
SLC44A4Q53GD3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP189-201ENST00000364920 115 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RNU6-996P-201ENST00000365438 107 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RNU6-61P-201ENST00000365528 109 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RNU6-328P-201ENST00000390887 106 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RNA5SP118-201ENST00000410385 109 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RN7SKP140-201ENST00000411196 284 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AL353678.1-201ENST00000422735 741 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 CYCSP32-201ENST00000440548 321 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC020550.1-201ENST00000447385 163 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AL356010.1-201ENST00000456364 102 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RN7SL93P-201ENST00000463035 293 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RPL23AP14-201ENST00000468281 468 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RPL32P34-201ENST00000486380 400 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 FGF7P4-201ENST00000509595 295 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 PCBP2P3-201ENST00000509726 843 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 RN7SKP289-201ENST00000517244 295 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 IGKV2-38-201ENST00000517443 247 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AL355836.1-201ENST00000555951 870 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 NCAPGP2-201ENST00000557911 754 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC067852.3-201ENST00000589177 561 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC013553.2-201ENST00000604244 589 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC005000.2-201ENST00000605468 310 ntBASIC3.92□□□□□ -1.78
SLC44A4Q53GD3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms