Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN1BQ07699 AC009902.1-201ENST00000519351 183 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN1BQ07699 AL121821.2-201ENST00000556081 394 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AL158211.1-201ENST00000566763 763 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 MIR3167-201ENST00000579623 85 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC005261.5-201ENST00000596280 355 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 BNIP3P8-201ENST00000597863 560 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AL451064.1-201ENST00000607718 471 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AC131902.3-201ENST00000611767 581 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 AL392088.2-201ENST00000637607 285 ntBASIC2.8□□□□□ -1.96
SCN1BQ07699 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN1BQ07699 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
SCN1BQ07699 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 RNU4-21P-201ENST00000362802 126 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 MIR301A-201ENST00000385261 86 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 SNORA26.8-201ENST00000391306 124 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 RPL23AP32-201ENST00000395315 459 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 RNA5SP492-201ENST00000411330 114 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 MTND2P18-201ENST00000419962 1030 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN1BQ07699 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AL161651.1-201ENST00000440882 223 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 RAP1BP2-201ENST00000478270 544 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN1BQ07699 Y_RNA.689-201ENST00000516589 107 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 SCARNA11.3-201ENST00000517276 130 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AC060788.1-201ENST00000521318 469 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 OR5B19P-201ENST00000531766 928 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN1BQ07699 AC007151.1-201ENST00000572774 483 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 MIR3117-201ENST00000584034 78 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC023043.3-201ENST00000593113 385 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 AC007938.3-201ENST00000604965 623 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN1BQ07699 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 OR8B1P-202ENST00000641132 1178 ntBASIC2.79□□□□□ -1.96
SCN1BQ07699 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCN1BQ07699 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN1BQ07699 MTND5P1-201ENST00000445440 1375 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC073343.1-201ENST00000328239 651 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 U3.26-201ENST00000391236 204 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 PTMAP2-201ENST00000397627 327 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AL049545.1-201ENST00000401856 572 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RNA5SP274-201ENST00000410484 108 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RNU6-1328P-201ENST00000410938 106 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 NPM1P11-201ENST00000417106 855 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AL158156.1-201ENST00000422509 473 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RPS24P1-201ENST00000438550 371 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 MTND6P13-201ENST00000443510 523 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN1BQ07699 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN1BQ07699 SNRPFP4-201ENST00000456366 242 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN1BQ07699 AL121769.1-201ENST00000469473 401 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 MTND3P7-201ENST00000474435 343 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC026801.1-201ENST00000497178 464 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC109927.2-201ENST00000506416 303 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN1BQ07699 SNORA31.6-201ENST00000516241 130 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RNA5SP76-201ENST00000516277 87 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RNU6-572P-201ENST00000516724 80 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 RNU6-1315P-201ENST00000517187 99 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC025755.1-201ENST00000521306 278 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 MTND3P12-201ENST00000559068 328 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN1BQ07699 MIR4276-201ENST00000584832 70 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 NRBF2P5-201ENST00000603087 788 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AL391813.1-201ENST00000603098 260 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 MIR15A-201ENST00000607334 83 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 U3.45-201ENST00000607547 219 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC091304.9-201ENST00000612091 226 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC008250.2-201ENST00000615261 205 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN1BQ07699 PISRT1-201ENST00000626175 531 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 AC025048.6-202ENST00000627667 438 ntBASIC2.78□□□□□ -1.96
SCN1BQ07699 MIR6733-201ENST00000635723 61 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms