Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SCN7AQ01118 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SCN7AQ01118 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN7AQ01118 RPS15AP38-201ENST00000413110 372 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 MTCO3P12-201ENST00000416718 547 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC005534.2-201ENST00000431047 433 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN7AQ01118 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC004022.1-201ENST00000447766 1066 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN7AQ01118 AC087854.1-201ENST00000519706 414 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.2□□□□□ -2.22
SCN7AQ01118 HSPE1P4-201ENST00000550617 308 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 MTCO2P22-201ENST00000603246 681 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC021749.1-201ENST00000604322 607 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 FAM71BP1-201ENST00000604431 523 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 AC004908.2-201ENST00000609090 574 ntBASIC1.2□□□□□ -2.22
SCN7AQ01118 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SCN7AQ01118 PMCHL2-203ENST00000457791 237 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 snoU13.28-201ENST00000459235 104 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 AC104689.1-201ENST00000473356 768 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.19□□□□□ -2.22
SCN7AQ01118 NDUFB4P2-201ENST00000509515 391 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 PRELID3BP4-201ENST00000515476 571 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN7AQ01118 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN7AQ01118 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN7AQ01118 POLR2KP1-201ENST00000553226 168 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.19□□□□□ -2.22
SCN7AQ01118 AC005498.1-201ENST00000592125 465 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC1.19□□□□□ -2.22
SCN7AQ01118 AC012443.1-201ENST00000605605 231 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 AC109809.1-201ENST00000619665 545 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 AL513185.3-201ENST00000433335 1300 ntBASIC1.19□□□□□ -2.22
SCN7AQ01118 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SCN7AQ01118 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SCN7AQ01118 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AC092648.1-201ENST00000425870 423 ntBASIC1.18□□□□□ -2.22
SCN7AQ01118 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN7AQ01118 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.18□□□□□ -2.22
SCN7AQ01118 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.18□□□□□ -2.22
SCN7AQ01118 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.18□□□□□ -2.22
SCN7AQ01118 AP001330.4-201ENST00000604350 154 ntBASIC1.18□□□□□ -2.22
SCN7AQ01118 AL360181.4-201ENST00000621752 134 ntBASIC1.18□□□□□ -2.22
SCN7AQ01118 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SCN7AQ01118 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SCN7AQ01118 MIR625-201ENST00000385047 85 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 U3.20-201ENST00000390909 217 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 AC099677.1-201ENST00000420575 175 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 USP12PX-201ENST00000432383 1057 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.17□□□□□ -2.22
SCN7AQ01118 AL500527.1-201ENST00000448532 255 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 RPL23AP3-201ENST00000453844 468 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 BX248409.1-201ENST00000455497 255 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 AC021087.2-201ENST00000504656 1203 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 SNORA31.25-201ENST00000517242 134 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 IMMP1LP2-201ENST00000552954 492 ntBASIC1.17□□□□□ -2.22
SCN7AQ01118 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SCN7AQ01118 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SCN7AQ01118 RNU6-37P-201ENST00000362692 107 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 RNU6-11P-201ENST00000364234 107 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SCN7AQ01118 U3.29-201ENST00000391296 212 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL136372.1-201ENST00000403060 228 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL512604.1-201ENST00000404812 257 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 CIR1P3-201ENST00000405137 479 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.16□□□□□ -2.22
SCN7AQ01118 AL161449.1-201ENST00000414531 1199 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 SEPT2P1-201ENST00000419651 180 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.16□□□□□ -2.22
SCN7AQ01118 XKRYP1-201ENST00000423438 492 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 XKRYP2-201ENST00000432915 492 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SCN7AQ01118 AC016691.1-201ENST00000441321 413 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC114801.2-201ENST00000503825 781 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN7AQ01118 AC008494.2-201ENST00000514544 370 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 RNU2-19P-201ENST00000517288 84 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.16□□□□□ -2.22
SCN7AQ01118 AC074029.2-201ENST00000551045 634 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 MIR4698-201ENST00000577795 80 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC090666.1-201ENST00000578241 445 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AC025165.5-201ENST00000602802 578 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 AL355297.2-201ENST00000604792 129 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN7AQ01118 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN7AQ01118 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SCN7AQ01118 Y_RNA.30-201ENST00000362572 97 ntBASIC1.16□□□□□ -2.22
SCN7AQ01118 RNU6-1243P-201ENST00000364028 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms