Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AC243773.3-201ENST00000613270 256 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AL354696.1-201ENST00000614652 497 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AL157770.1-201ENST00000623049 439 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC025048.6-202ENST00000627667 438 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.65□□□□□ -2.15
HOXC5Q00444 AC010329.5-201ENST00000623497 2174 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 AC107982.1-201ENST00000507171 1300 ntBASIC1.65□□□□□ -2.15
HOXC5Q00444 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HOXC5Q00444 RNU6-343P-201ENST00000364709 104 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 RNA5SP126-201ENST00000365092 109 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC5Q00444 RNU6-468P-201ENST00000384003 109 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HOXC5Q00444 RNU4-26P-201ENST00000410270 107 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 RN7SKP192-201ENST00000411291 327 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXC5Q00444 MTCO1P3-201ENST00000429327 192 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 RPL17P35-201ENST00000432217 549 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 MTND4P15-201ENST00000437913 1033 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 USP9YP22-201ENST00000438971 294 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 MOB1AP2-201ENST00000446060 614 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AL096829.2-201ENST00000446582 742 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXC5Q00444 snoU13.8-201ENST00000458890 104 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 RPS20P22-201ENST00000473700 357 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 RPS27AP10-201ENST00000496103 208 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC5Q00444 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXC5Q00444 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXC5Q00444 CBX3P7-201ENST00000532876 502 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AL359212.1-201ENST00000556608 614 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.64□□□□□ -2.15
HOXC5Q00444 MIR5708-201ENST00000579723 85 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AC024619.4-201ENST00000580924 316 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXC5Q00444 AC107214.2-201ENST00000608204 634 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AC013476.2-201ENST00000614456 459 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 AC253576.2-201ENST00000618815 580 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.64□□□□□ -2.15
HOXC5Q00444 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC5Q00444 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
HOXC5Q00444 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC5Q00444 AL356473.1-201ENST00000406203 1408 ntBASIC1.64□□□□□ -2.15
HOXC5Q00444 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HOXC5Q00444 RNU6-1078P-201ENST00000364522 103 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.63□□□□□ -2.15
HOXC5Q00444 SNORA40.18-201ENST00000391200 128 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC019129.1-201ENST00000403786 261 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 CIR1P3-201ENST00000405137 479 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 RPL23AP39-201ENST00000415533 405 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 MTCO2P5-201ENST00000422621 426 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 RPL30P4-201ENST00000429309 333 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AL645568.3-201ENST00000433683 316 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC079776.3-201ENST00000450665 370 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC5Q00444 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.63□□□□□ -2.15
HOXC5Q00444 HMGB3P17-201ENST00000504195 649 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC092436.1-201ENST00000506450 503 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 SCARNA3-201ENST00000517097 143 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AL138478.1-201ENST00000612252 832 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AC024257.5-201ENST00000612739 531 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AC005332.6-201ENST00000613178 446 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 SDR42E1P2-201ENST00000614861 481 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 SDR42E1P4-201ENST00000620894 481 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.63□□□□□ -2.15
HOXC5Q00444 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HOXC5Q00444 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.63□□□□□ -2.15
HOXC5Q00444 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HOXC5Q00444 AL138713.1-201ENST00000624026 2130 ntBASIC1.63□□□□□ -2.15
HOXC5Q00444 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HOXC5Q00444 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HOXC5Q00444 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.62□□□□□ -2.15
HOXC5Q00444 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
HOXC5Q00444 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HOXC5Q00444 RNU6-637P-201ENST00000384050 107 ntBASIC1.62□□□□□ -2.15
HOXC5Q00444 AL603865.2-201ENST00000401679 213 ntBASIC1.62□□□□□ -2.15
HOXC5Q00444 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HOXC5Q00444 AL451054.2-201ENST00000420896 202 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms