Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.5□□□□□ -2.33
HSPG2P98160 RNA5SP511-201ENST00000410487 115 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 RNU6-1077P-201ENST00000410506 102 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 ZNF90P2-204ENST00000419323 1075 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AL031663.1-201ENST00000437445 219 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HSPG2P98160 HMGN2P21-201ENST00000447764 270 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC121161.1-201ENST00000510606 652 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.5□□□□□ -2.33
HSPG2P98160 AC073544.1-201ENST00000600110 1595 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 RNU6-1235P-201ENST00000384559 107 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 RPL23AP32-201ENST00000395315 459 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 Z80107.1-201ENST00000436830 412 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.5□□□□□ -2.33
HSPG2P98160 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.5□□□□□ -2.33
HSPG2P98160 HMGN2P16-201ENST00000456802 261 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 RNU6-498P-201ENST00000459468 107 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC023141.11-201ENST00000508864 202 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 HMGB3P3-201ENST00000510526 400 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 HMGN1P30-201ENST00000589286 268 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AL161912.3-201ENST00000605404 628 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC006065.5-201ENST00000623427 349 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 OR4G3P-201ENST00000633500 913 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 ELL2P3-201ENST00000457883 1602 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
HSPG2P98160 Y_RNA.488-201ENST00000384403 102 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 U8.14-201ENST00000390843 143 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 MIR1912-201ENST00000410389 80 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 HMGN2P10-201ENST00000448085 265 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.5□□□□□ -2.33
HSPG2P98160 AC010627.1-201ENST00000503819 1294 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC009901.1-201ENST00000506703 541 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.5□□□□□ -2.33
HSPG2P98160 RNA5SP105-201ENST00000391123 113 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC098592.2-201ENST00000413158 265 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 SDAD1P3-201ENST00000427380 333 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 SNORA31.25-201ENST00000517242 134 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.5□□□□□ -2.33
HSPG2P98160 RNU4-7P-201ENST00000364758 141 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 HMGN1P10-201ENST00000474557 553 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 RNU6-928P-201ENST00000516876 104 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 SCARNA1-201ENST00000517138 166 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 SNORD114-2-201ENST00000363953 78 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 Y_RNA.324-201ENST00000365165 102 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 Z95118.1-201ENST00000421372 247 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 RPS6P14-201ENST00000425165 719 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 RNA5SP285-201ENST00000516619 119 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 RNU4-77P-201ENST00000516692 156 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
HSPG2P98160 AC245128.3-201ENST00000594721 748 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 AC067838.1-201ENST00000606064 577 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 HMGB3P31-201ENST00000413333 595 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 ARL2BPP3-201ENST00000421226 480 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC060773.1-201ENST00000421698 310 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.49□□□□□ -2.33
HSPG2P98160 AL353898.1-201ENST00000444055 238 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC027575.1-201ENST00000481064 460 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 MTCO3P35-201ENST00000485582 781 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 RNU6-347P-201ENST00000516658 105 ntBASIC0.49□□□□□ -2.33
HSPG2P98160 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.49□□□□□ -2.33
HSPG2P98160 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.49□□□□□ -2.33
HSPG2P98160 RNU6-418P-201ENST00000384035 107 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC068050.1-201ENST00000394891 380 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RPL31P52-201ENST00000407532 367 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC092745.2-202ENST00000411880 369 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RPL21P24-201ENST00000413752 448 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RNU6-1218P-201ENST00000458990 108 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RNU6-351P-201ENST00000516097 100 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC104997.1-201ENST00000519761 717 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC093510.2-201ENST00000562820 896 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 MIR4287-201ENST00000579398 78 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC078899.2-201ENST00000595282 212 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.48□□□□□ -2.33
HSPG2P98160 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.48□□□□□ -2.33
HSPG2P98160 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
HSPG2P98160 ZNF519P1-201ENST00000449011 1626 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
HSPG2P98160 SNORA14A-201ENST00000364773 135 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 FTH1P15-201ENST00000406984 280 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 RNA5SP266-201ENST00000410273 108 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 MTND4LP21-201ENST00000415303 295 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.48□□□□□ -2.33
HSPG2P98160 ERHP1-201ENST00000523006 310 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AC008269.2-201ENST00000561915 1105 ntBASIC0.48□□□□□ -2.33
HSPG2P98160 AL355812.1-201ENST00000603215 216 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms