Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 UBBP3-201ENST00000445497 241 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AP001960.1-201ENST00000506494 658 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 SNORA31.20-201ENST00000517111 133 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.63□□□□□ -2.31
PRKDCP78527 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 UBE2L4-201ENST00000587688 464 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 PCNAP1-202ENST00000595299 752 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AC139769.3-201ENST00000618383 175 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.63□□□□□ -2.31
PRKDCP78527 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.63□□□□□ -2.31
PRKDCP78527 MIR147B-201ENST00000390185 80 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 RPS4XP3-201ENST00000398541 413 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.63□□□□□ -2.31
PRKDCP78527 AC005908.1-201ENST00000468701 347 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 NCOR1P1-202ENST00000486162 291 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 MRPS33P3-201ENST00000513456 322 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 RNU6-943P-201ENST00000516960 98 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 MTCYBP41-201ENST00000528913 1123 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.63□□□□□ -2.31
PRKDCP78527 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.63□□□□□ -2.31
PRKDCP78527 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
PRKDCP78527 Y_RNA.167-201ENST00000363735 109 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 ANAPC10P1-201ENST00000395991 556 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.63□□□□□ -2.31
PRKDCP78527 OR51AB1P-201ENST00000429046 620 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 SNORD97-201ENST00000459187 142 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 RPL30P14-201ENST00000482744 348 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 AC091304.6-201ENST00000619761 202 ntBASIC0.63□□□□□ -2.31
PRKDCP78527 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PRKDCP78527 Y_RNA.549-201ENST00000384657 102 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 RNA5SP511-201ENST00000410487 115 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 USP9YP35-201ENST00000435696 412 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AC021749.1-201ENST00000604322 607 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 OR4G3P-201ENST00000633500 913 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.62□□□□□ -2.31
PRKDCP78527 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.62□□□□□ -2.31
PRKDCP78527 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.62□□□□□ -2.31
PRKDCP78527 HSPE1P24-201ENST00000450782 238 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.62□□□□□ -2.31
PRKDCP78527 AC133963.2-201ENST00000513686 578 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 SNORA48.9-201ENST00000516419 162 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 HSBP1P1-201ENST00000555205 166 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AL391261.3-201ENST00000557194 520 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.62□□□□□ -2.31
PRKDCP78527 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.62□□□□□ -2.31
PRKDCP78527 MT-TP-201ENST00000387461 68 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AL512661.1-201ENST00000434586 1253 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AC104685.1-201ENST00000502445 371 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AC083923.1-201ENST00000523708 376 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.62□□□□□ -2.31
PRKDCP78527 AL390862.1-201ENST00000635467 1469 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
PRKDCP78527 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
PRKDCP78527 MIR607-201ENST00000385241 96 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 HSFY3P-201ENST00000444242 1191 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.62□□□□□ -2.31
PRKDCP78527 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.62□□□□□ -2.31
PRKDCP78527 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.62□□□□□ -2.31
PRKDCP78527 AC021646.1-201ENST00000605469 484 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 AC107214.2-201ENST00000608204 634 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 MIR7515-201ENST00000637837 67 ntBASIC0.62□□□□□ -2.31
PRKDCP78527 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
PRKDCP78527 AC073544.1-201ENST00000600110 1595 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-1331P-201ENST00000363658 106 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 SNORA2A-201ENST00000383885 135 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 CISD1P1-201ENST00000393907 327 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RN7SKP158-201ENST00000410453 326 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 UBE2V1P9-201ENST00000414760 368 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 LINC01347-201ENST00000417964 355 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.61□□□□□ -2.31
PRKDCP78527 GTF2IP12-201ENST00000456547 356 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RNA5SP310-201ENST00000459084 116 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC008379.1-201ENST00000463655 464 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AL121769.1-201ENST00000469473 401 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC067942.3-201ENST00000512025 362 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RNU5F-8P-201ENST00000515941 111 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 MTND4LP24-201ENST00000572277 291 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.61□□□□□ -2.31
PRKDCP78527 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-16P-201ENST00000384385 107 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-1235P-201ENST00000384559 107 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.61□□□□□ -2.31
PRKDCP78527 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-498P-201ENST00000459468 107 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 MTND4LP3-201ENST00000468320 276 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.61□□□□□ -2.31
PRKDCP78527 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.61□□□□□ -2.31
PRKDCP78527 AP003072.4-201ENST00000624580 310 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC068620.4-201ENST00000636730 1182 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 NACAP2-201ENST00000318548 624 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 RNU6-288P-201ENST00000363690 104 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.61□□□□□ -2.31
PRKDCP78527 AL031663.1-201ENST00000437445 219 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 SUMO2P2-201ENST00000456482 255 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 AC097493.1-201ENST00000463958 372 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.61□□□□□ -2.31
PRKDCP78527 AC112518.2-201ENST00000508565 425 ntBASIC0.61□□□□□ -2.31
PRKDCP78527 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms