Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.84□□□□□ -1.95
CX3CL1P78423 MTCO3P30-201ENST00000426425 670 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 BX679664.1-201ENST00000434429 253 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 MTND1P4-201ENST00000435196 415 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC010099.1-201ENST00000455434 375 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 SNORD105B-201ENST00000458770 79 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RN7SL442P-201ENST00000473804 320 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 HMGN2P13-201ENST00000476476 274 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC117522.3-201ENST00000507974 584 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AC104806.1-201ENST00000508720 308 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 RN7SKP18-201ENST00000516005 275 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU2-27P-201ENST00000516185 142 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU1-95P-201ENST00000516357 160 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU1-128P-201ENST00000516704 160 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU6-685P-201ENST00000517088 95 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 RNU1-45P-201ENST00000517191 141 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 RANP3-201ENST00000530970 276 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.84□□□□□ -1.95
CX3CL1P78423 AC006130.2-201ENST00000586202 326 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AP001596.2-201ENST00000608410 312 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 AP003355.3-201ENST00000623465 114 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.84□□□□□ -1.95
CX3CL1P78423 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CX3CL1P78423 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
CX3CL1P78423 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
CX3CL1P78423 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CX3CL1P78423 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CX3CL1P78423 MTND4P5-201ENST00000435821 1374 ntBASIC2.84□□□□□ -1.96
CX3CL1P78423 ZNF285B-201ENST00000561698 1767 ntBASIC2.84□□□□□ -1.96
CX3CL1P78423 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
CX3CL1P78423 AL513302.2-201ENST00000562313 1842 ntBASIC2.84□□□□□ -1.96
CX3CL1P78423 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CX3CL1P78423 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.83□□□□□ -1.96
CX3CL1P78423 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 SNORA73.2-201ENST00000364946 201 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RNU6-517P-201ENST00000384362 110 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 MIR181A1-201ENST00000385026 110 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RNA5SP293-201ENST00000410527 113 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RAB9AP3-201ENST00000412737 573 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC099548.1-201ENST00000421443 426 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CL1P78423 RPL23AP82-202ENST00000427528 469 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 TIMM9P3-201ENST00000428659 274 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AL591704.1-201ENST00000432574 275 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 NEK4P1-201ENST00000433383 879 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AL606489.2-201ENST00000433886 234 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AL596276.1-201ENST00000434465 418 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RPL7P54-201ENST00000438336 674 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 HIGD1AP11-201ENST00000438361 280 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RAB9AP1-201ENST00000449393 573 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CL1P78423 RPS27P29-201ENST00000463110 252 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC233702.1-201ENST00000482905 502 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC109927.2-201ENST00000506416 303 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC092436.1-201ENST00000506450 503 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC108043.1-201ENST00000512696 574 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 SNORA40.12-201ENST00000516329 111 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 Y_RNA.693-201ENST00000516641 110 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 RNU6-711P-201ENST00000517255 106 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC023632.4-201ENST00000517783 191 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AP003122.3-201ENST00000526316 255 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC084851.1-201ENST00000529105 249 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC104383.1-201ENST00000530297 370 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 AK6P1-201ENST00000540219 478 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.83□□□□□ -1.96
CX3CL1P78423 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.83□□□□□ -1.96
CX3CL1P78423 HMGB1P33-201ENST00000563485 527 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC068135.2-201ENST00000569293 1028 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 MTATP6P3-201ENST00000581686 676 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC007621.1-201ENST00000604544 437 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC099778.2-201ENST00000610904 211 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 CR392039.5-201ENST00000623201 510 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC068137.3-201ENST00000639191 341 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 AC073869.6-201ENST00000640656 341 ntBASIC2.83□□□□□ -1.96
CX3CL1P78423 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.83□□□□□ -1.96
CX3CL1P78423 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CX3CL1P78423 AC005183.1-201ENST00000603687 1979 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms