Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
ACTBP60709 NACAP3-201ENST00000552100 481 ntBASIC1.78□□□□□ -2.12
ACTBP60709 SNRPGP1-201ENST00000553864 222 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.78□□□□□ -2.12
ACTBP60709 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.78□□□□□ -2.12
ACTBP60709 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTBP60709 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTBP60709 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTBP60709 AC007349.4-201ENST00000608114 532 ntBASIC1.78□□□□□ -2.12
ACTBP60709 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.78□□□□□ -2.12
ACTBP60709 AC243773.3-201ENST00000613270 256 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL357080.1-201ENST00000617394 239 ntBASIC1.78□□□□□ -2.12
ACTBP60709 AL445264.1-201ENST00000621719 171 ntBASIC1.78□□□□□ -2.12
ACTBP60709 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
ACTBP60709 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
ACTBP60709 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.77□□□□□ -2.13
ACTBP60709 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.77□□□□□ -2.13
ACTBP60709 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.77□□□□□ -2.13
ACTBP60709 RPS29P20-201ENST00000489592 171 ntBASIC1.77□□□□□ -2.13
ACTBP60709 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC006499.2-201ENST00000513470 337 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.77□□□□□ -2.13
ACTBP60709 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 LINC00933-203ENST00000559812 219 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC027807.1-201ENST00000559921 996 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC009063.1-201ENST00000563342 702 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ACTBP60709 AL391813.1-201ENST00000603098 260 ntBASIC1.77□□□□□ -2.13
ACTBP60709 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
ACTBP60709 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 MIR6873-201ENST00000622788 63 ntBASIC1.77□□□□□ -2.13
ACTBP60709 PISRT1-201ENST00000626175 531 ntBASIC1.77□□□□□ -2.13
ACTBP60709 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ACTBP60709 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ACTBP60709 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.77□□□□□ -2.13
ACTBP60709 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ACTBP60709 CDR1-202ENST00000625883 1485 ntBASIC1.76□□□□□ -2.13
ACTBP60709 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ACTBP60709 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
ACTBP60709 RNU6-884P-201ENST00000363889 107 ntBASIC1.76□□□□□ -2.13
ACTBP60709 RNU2-63P-201ENST00000410792 194 ntBASIC1.76□□□□□ -2.13
ACTBP60709 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.76□□□□□ -2.13
ACTBP60709 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.76□□□□□ -2.13
ACTBP60709 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.76□□□□□ -2.13
ACTBP60709 AC098831.1-201ENST00000440661 216 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.76□□□□□ -2.13
ACTBP60709 ARPC3P5-201ENST00000448802 534 ntBASIC1.76□□□□□ -2.13
ACTBP60709 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.76□□□□□ -2.13
ACTBP60709 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.76□□□□□ -2.13
ACTBP60709 AF213884.2-201ENST00000510417 903 ntBASIC1.76□□□□□ -2.13
ACTBP60709 FAM92A1P1-201ENST00000528023 890 ntBASIC1.76□□□□□ -2.13
ACTBP60709 SLC2A13P1-201ENST00000531560 322 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.76□□□□□ -2.13
ACTBP60709 AC091544.4-201ENST00000555268 342 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.76□□□□□ -2.13
ACTBP60709 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AL512506.1-201ENST00000613918 449 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AC023158.2-201ENST00000614876 543 ntBASIC1.76□□□□□ -2.13
ACTBP60709 AL590808.1-201ENST00000618696 141 ntBASIC1.76□□□□□ -2.13
ACTBP60709 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ACTBP60709 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ACTBP60709 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ACTBP60709 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.75□□□□□ -2.13
ACTBP60709 AC110491.1-201ENST00000562191 2010 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RNU6-486P-201ENST00000363116 107 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RNU5B-4P-201ENST00000363508 111 ntBASIC1.75□□□□□ -2.13
ACTBP60709 XGY1-201ENST00000381172 446 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AL135786.1-201ENST00000415892 214 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.75□□□□□ -2.13
ACTBP60709 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.75□□□□□ -2.13
ACTBP60709 AL451054.2-201ENST00000420896 202 ntBASIC1.75□□□□□ -2.13
ACTBP60709 BPY2DP-201ENST00000422208 265 ntBASIC1.75□□□□□ -2.13
ACTBP60709 OOSP1P1-201ENST00000423265 274 ntBASIC1.75□□□□□ -2.13
ACTBP60709 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.75□□□□□ -2.13
ACTBP60709 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.75□□□□□ -2.13
ACTBP60709 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.75□□□□□ -2.13
ACTBP60709 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.75□□□□□ -2.13
ACTBP60709 RPL12P25-201ENST00000455592 494 ntBASIC1.75□□□□□ -2.13
ACTBP60709 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.75□□□□□ -2.13
ACTBP60709 snoU109.1-201ENST00000459339 135 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RPL23AP42-201ENST00000471152 471 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RN7SL429P-201ENST00000479090 223 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RN7SL489P-201ENST00000486185 223 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RN7SL327P-201ENST00000488659 223 ntBASIC1.75□□□□□ -2.13
ACTBP60709 ANXA2P1-201ENST00000505539 926 ntBASIC1.75□□□□□ -2.13
ACTBP60709 RNU6-714P-201ENST00000516963 103 ntBASIC1.75□□□□□ -2.13
ACTBP60709 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.75□□□□□ -2.13
ACTBP60709 AC104417.1-201ENST00000523974 751 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AP003497.1-201ENST00000528472 562 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AP003049.1-201ENST00000529418 457 ntBASIC1.75□□□□□ -2.13
ACTBP60709 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms