Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPL36AP6-201ENST00000435770 321 ntBASIC2.83□□□□□ -1.96
VCPP55072 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.83□□□□□ -1.96
VCPP55072 AL139824.2-201ENST00000458731 1095 ntBASIC2.83□□□□□ -1.96
VCPP55072 RPL23AP70-201ENST00000483361 460 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC132942.1-201ENST00000486753 483 ntBASIC2.83□□□□□ -1.96
VCPP55072 OR5BM1P-201ENST00000512021 366 ntBASIC2.83□□□□□ -1.96
VCPP55072 RNU6-826P-201ENST00000516827 104 ntBASIC2.83□□□□□ -1.96
VCPP55072 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
VCPP55072 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
VCPP55072 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
VCPP55072 ELOCP31-201ENST00000540463 467 ntBASIC2.83□□□□□ -1.96
VCPP55072 MIR4648-201ENST00000580107 72 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.83□□□□□ -1.96
VCPP55072 AC060771.1-201ENST00000582031 164 ntBASIC2.83□□□□□ -1.96
VCPP55072 UBE2L4-201ENST00000587688 464 ntBASIC2.83□□□□□ -1.96
VCPP55072 AL357094.1-201ENST00000603845 844 ntBASIC2.83□□□□□ -1.96
VCPP55072 AP000787.2-201ENST00000604432 568 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC018638.7-201ENST00000605836 1114 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC107214.2-201ENST00000608204 634 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.83□□□□□ -1.96
VCPP55072 AL158801.5-201ENST00000623123 465 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC025034.2-201ENST00000623264 286 ntBASIC2.83□□□□□ -1.96
VCPP55072 AC073308.1-201ENST00000623696 305 ntBASIC2.83□□□□□ -1.96
VCPP55072 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VCPP55072 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCPP55072 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VCPP55072 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
VCPP55072 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCPP55072 ZNF72P-201ENST00000425869 1908 ntBASIC2.82□□□□□ -1.96
VCPP55072 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VCPP55072 Y_RNA.4-201ENST00000362333 112 ntBASIC2.82□□□□□ -1.96
VCPP55072 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
VCPP55072 SNORD114-30-201ENST00000364448 72 ntBASIC2.82□□□□□ -1.96
VCPP55072 MIR325-201ENST00000385260 98 ntBASIC2.82□□□□□ -1.96
VCPP55072 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
VCPP55072 RNU6-193P-201ENST00000410977 107 ntBASIC2.82□□□□□ -1.96
VCPP55072 RNU6-516P-201ENST00000411381 104 ntBASIC2.82□□□□□ -1.96
VCPP55072 AL359704.1-201ENST00000411586 781 ntBASIC2.82□□□□□ -1.96
VCPP55072 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
VCPP55072 AL365496.1-201ENST00000426885 215 ntBASIC2.82□□□□□ -1.96
VCPP55072 TAAR7P-201ENST00000436141 242 ntBASIC2.82□□□□□ -1.96
VCPP55072 MTCYBP39-201ENST00000437562 491 ntBASIC2.82□□□□□ -1.96
VCPP55072 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 MTND4LP3-201ENST00000468320 276 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.82□□□□□ -1.96
VCPP55072 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.82□□□□□ -1.96
VCPP55072 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 MTATP6P15-201ENST00000527233 835 ntBASIC2.82□□□□□ -1.96
VCPP55072 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 AC068135.2-201ENST00000569293 1028 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC010546.1-201ENST00000569391 485 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.82□□□□□ -1.96
VCPP55072 AP001004.1-201ENST00000582468 324 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC013553.2-201ENST00000604244 589 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC008277.2-201ENST00000605196 797 ntBASIC2.82□□□□□ -1.96
VCPP55072 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC004852.3-201ENST00000614131 326 ntBASIC2.82□□□□□ -1.96
VCPP55072 AC091304.6-201ENST00000619761 202 ntBASIC2.82□□□□□ -1.96
VCPP55072 UCA1.1-201ENST00000620952 75 ntBASIC2.82□□□□□ -1.96
VCPP55072 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCPP55072 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VCPP55072 MTND5P33-201ENST00000571250 1450 ntBASIC2.82□□□□□ -1.96
VCPP55072 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VCPP55072 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.82□□□□□ -1.96
VCPP55072 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VCPP55072 RNU6-1035P-201ENST00000384477 107 ntBASIC2.81□□□□□ -1.96
VCPP55072 RNU6-754P-201ENST00000391166 107 ntBASIC2.81□□□□□ -1.96
VCPP55072 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.81□□□□□ -1.96
VCPP55072 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.81□□□□□ -1.96
VCPP55072 AL590383.1-201ENST00000428602 75 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL356867.1-201ENST00000429623 299 ntBASIC2.81□□□□□ -1.96
VCPP55072 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AL512844.2-201ENST00000433990 593 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL714022.1-201ENST00000439897 151 ntBASIC2.81□□□□□ -1.96
VCPP55072 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VCPP55072 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AC008571.1-201ENST00000467232 300 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC116337.2-201ENST00000477662 156 ntBASIC2.81□□□□□ -1.96
VCPP55072 RPS3AP22-201ENST00000488297 769 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL049874.1-201ENST00000489560 388 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC092436.1-201ENST00000506450 503 ntBASIC2.81□□□□□ -1.96
VCPP55072 TTC39CP1-201ENST00000512513 755 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.81□□□□□ -1.96
VCPP55072 RNA5SP458-201ENST00000516188 119 ntBASIC2.81□□□□□ -1.96
VCPP55072 HMGN1P28-201ENST00000521340 364 ntBASIC2.81□□□□□ -1.96
VCPP55072 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.81□□□□□ -1.96
VCPP55072 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.81□□□□□ -1.96
VCPP55072 AC008015.1-201ENST00000555505 465 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.81□□□□□ -1.96
VCPP55072 AC103810.1-201ENST00000579873 453 ntBASIC2.81□□□□□ -1.96
VCPP55072 AC112187.2-201ENST00000604345 283 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL360219.1-201ENST00000610230 366 ntBASIC2.81□□□□□ -1.96
VCPP55072 AL603758.1-201ENST00000618654 241 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms