Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PRSS3P4-201ENST00000453323 162 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC022364.2-201ENST00000457963 554 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RPS15AP34-201ENST00000487776 387 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC026801.1-201ENST00000497178 464 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNA5SP208-201ENST00000516156 78 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 RNU6-410P-201ENST00000517006 107 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H2P55055 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.42□□□□□ -1.86
NR1H2P55055 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.42□□□□□ -1.86
NR1H2P55055 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NR1H2P55055 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H2P55055 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.42□□□□□ -1.86
NR1H2P55055 AL391646.1-201ENST00000603860 190 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC107304.1-201ENST00000604229 296 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC084757.4-201ENST00000616350 526 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AL357559.1-201ENST00000622228 274 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AC099506.2-201ENST00000623074 221 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 CR381653.2-201ENST00000624041 768 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AL157786.1-207ENST00000627771 695 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.42□□□□□ -1.86
NR1H2P55055 AL034408.1-202ENST00000636088 415 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 AL732372.2-225ENST00000642124 456 ntBASIC3.42□□□□□ -1.86
NR1H2P55055 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H2P55055 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H2P55055 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H2P55055 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H2P55055 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H2P55055 FRG1CP-201ENST00000358464 769 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 RNU1-105P-201ENST00000363470 161 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 RNU6-108P-201ENST00000365558 107 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 Y_RNA.409-201ENST00000383990 98 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 RNU6-190P-201ENST00000384154 102 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 RNU6-14P-201ENST00000384630 106 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 MIR301A-201ENST00000385261 86 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H2P55055 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H2P55055 MRPL50P2-201ENST00000416821 482 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AL139247.1-201ENST00000422768 325 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H2P55055 MTCO2P19-201ENST00000427513 598 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 DPPA2P1-201ENST00000428060 556 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC093106.2-201ENST00000428212 385 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H2P55055 FABP5P15-201ENST00000453566 214 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H2P55055 AC093899.1-201ENST00000457984 376 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H2P55055 AC079382.1-201ENST00000493346 557 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.41□□□□□ -1.86
NR1H2P55055 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H2P55055 AC136619.2-201ENST00000563361 631 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 TPRKBP2-201ENST00000565969 475 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AP003465.2-201ENST00000602571 373 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AL355598.1-201ENST00000604169 202 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 NUTF2P8-201ENST00000604593 363 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC126118.1-201ENST00000607744 628 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 AC009161.2-201ENST00000624626 138 ntBASIC3.41□□□□□ -1.86
NR1H2P55055 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
NR1H2P55055 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NR1H2P55055 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.41□□□□□ -1.86
NR1H2P55055 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.4□□□□□ -1.86
NR1H2P55055 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NR1H2P55055 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
NR1H2P55055 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NR1H2P55055 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H2P55055 Y_RNA.22-201ENST00000362492 102 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 Y_RNA.159-201ENST00000363674 87 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 RNU6-188P-201ENST00000364207 107 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 RNU6-512P-201ENST00000364438 103 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 RNU6-641P-201ENST00000384006 107 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 Y_RNA.554-201ENST00000384672 102 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 MIR1-2-201ENST00000384961 85 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NR1H2P55055 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NR1H2P55055 CALM2P3-201ENST00000400429 449 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 RNU6-387P-201ENST00000411331 105 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AC080125.1-201ENST00000414888 684 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H2P55055 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 HMGB3P20-201ENST00000417997 600 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.4□□□□□ -1.87
NR1H2P55055 HMGN2P30-201ENST00000423237 256 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.4□□□□□ -1.87
NR1H2P55055 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 HMGB1P9-201ENST00000429856 646 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AL714022.1-201ENST00000439897 151 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 DDX3P2-201ENST00000446138 111 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AC026427.2-201ENST00000506228 536 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 HMGN1P11-201ENST00000508668 303 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.4□□□□□ -1.87
NR1H2P55055 SNORA64.4-201ENST00000516632 81 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.4□□□□□ -1.87
NR1H2P55055 AP006245.1-201ENST00000522549 120 ntBASIC3.4□□□□□ -1.87
NR1H2P55055 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms