Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-203P-201ENST00000384038 104 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AL355615.1-201ENST00000406187 641 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AL030996.1-201ENST00000411430 235 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AL590623.1-201ENST00000427864 105 ntBASIC1.55□□□□□ -2.16
NUP98P52948 VN1R108P-201ENST00000431580 830 ntBASIC1.55□□□□□ -2.16
NUP98P52948 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.55□□□□□ -2.16
NUP98P52948 PNPLA4P1-201ENST00000458328 305 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC022493.1-201ENST00000492984 337 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.55□□□□□ -2.16
NUP98P52948 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.55□□□□□ -2.16
NUP98P52948 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.55□□□□□ -2.16
NUP98P52948 SNORD39.3-201ENST00000584451 71 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.55□□□□□ -2.16
NUP98P52948 AC103710.4-201ENST00000609301 899 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC008121.3-201ENST00000618726 433 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC040168.1-201ENST00000623594 991 ntBASIC1.55□□□□□ -2.16
NUP98P52948 AC079597.1-201ENST00000624306 508 ntBASIC1.55□□□□□ -2.16
NUP98P52948 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.55□□□□□ -2.16
NUP98P52948 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
NUP98P52948 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
NUP98P52948 Y_RNA.540-201ENST00000384638 111 ntBASIC1.54□□□□□ -2.16
NUP98P52948 U3.40-201ENST00000408706 208 ntBASIC1.54□□□□□ -2.16
NUP98P52948 MIR1290-201ENST00000408735 78 ntBASIC1.54□□□□□ -2.16
NUP98P52948 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.54□□□□□ -2.16
NUP98P52948 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AL049714.1-201ENST00000466686 347 ntBASIC1.54□□□□□ -2.16
NUP98P52948 NDUFB4P2-201ENST00000509515 391 ntBASIC1.54□□□□□ -2.16
NUP98P52948 ATP5EP1-201ENST00000510257 156 ntBASIC1.54□□□□□ -2.16
NUP98P52948 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.54□□□□□ -2.16
NUP98P52948 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AC022447.1-201ENST00000515358 464 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AP005136.1-201ENST00000579765 429 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AC107214.2-201ENST00000608204 634 ntBASIC1.54□□□□□ -2.16
NUP98P52948 OR4G11P-202ENST00000642116 1414 ntBASIC1.54□□□□□ -2.16
NUP98P52948 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
NUP98P52948 CDC27P3-201ENST00000635418 1910 ntBASIC1.54□□□□□ -2.16
NUP98P52948 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NUP98P52948 RNU6-1155P-201ENST00000363554 107 ntBASIC1.54□□□□□ -2.16
NUP98P52948 SNORA3A-201ENST00000364113 130 ntBASIC1.54□□□□□ -2.16
NUP98P52948 RPS3AP24-201ENST00000407896 734 ntBASIC1.54□□□□□ -2.16
NUP98P52948 SEPT2P1-201ENST00000419651 180 ntBASIC1.54□□□□□ -2.16
NUP98P52948 MTND5P25-201ENST00000430499 799 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.54□□□□□ -2.16
NUP98P52948 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 AC019176.1-201ENST00000518519 225 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AP002748.2-201ENST00000528671 348 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AP003066.2-201ENST00000529375 555 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.54□□□□□ -2.16
NUP98P52948 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.54□□□□□ -2.16
NUP98P52948 OR1M4P-201ENST00000589199 287 ntBASIC1.54□□□□□ -2.16
NUP98P52948 AL020997.3-201ENST00000602843 359 ntBASIC1.54□□□□□ -2.16
NUP98P52948 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.54□□□□□ -2.16
NUP98P52948 AL133216.2-202ENST00000634512 349 ntBASIC1.54□□□□□ -2.16
NUP98P52948 CENPCP1-201ENST00000533085 2578 ntBASIC1.53□□□□□ -2.16
NUP98P52948 RNU6-1032P-201ENST00000384100 107 ntBASIC1.53□□□□□ -2.16
NUP98P52948 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AL033519.2-201ENST00000403958 392 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AL589655.1-201ENST00000405398 482 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.53□□□□□ -2.16
NUP98P52948 MTND4P24-201ENST00000424002 397 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.53□□□□□ -2.16
NUP98P52948 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.53□□□□□ -2.16
NUP98P52948 AC092170.1-201ENST00000440211 356 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP98P52948 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.53□□□□□ -2.16
NUP98P52948 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.53□□□□□ -2.16
NUP98P52948 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.53□□□□□ -2.16
NUP98P52948 AC022662.1-201ENST00000580252 331 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.53□□□□□ -2.16
NUP98P52948 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.53□□□□□ -2.16
NUP98P52948 FRG1HP-204ENST00000617940 757 ntBASIC1.53□□□□□ -2.16
NUP98P52948 AC073592.7-201ENST00000623659 507 ntBASIC1.53□□□□□ -2.16
NUP98P52948 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
NUP98P52948 AC068700.1-201ENST00000565862 3754 ntBASIC1.53□□□□□ -2.17
NUP98P52948 GDI2P1-201ENST00000429312 1336 ntBASIC1.53□□□□□ -2.17
NUP98P52948 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 AC005345.1-201ENST00000431868 217 ntBASIC1.52□□□□□ -2.17
NUP98P52948 TAAR7P-201ENST00000436141 242 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 BMI1P1-201ENST00000445879 941 ntBASIC1.52□□□□□ -2.17
NUP98P52948 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.52□□□□□ -2.17
NUP98P52948 RPL30P5-201ENST00000494923 336 ntBASIC1.52□□□□□ -2.17
NUP98P52948 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 AC022483.1-201ENST00000514020 567 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.52□□□□□ -2.17
NUP98P52948 AL138976.2-201ENST00000563989 694 ntBASIC1.52□□□□□ -2.17
NUP98P52948 MTATP6P3-201ENST00000581686 676 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC090897.2-201ENST00000581715 130 ntBASIC1.52□□□□□ -2.17
NUP98P52948 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 AC073413.2-201ENST00000604332 360 ntBASIC1.52□□□□□ -2.17
NUP98P52948 BX322635.1-201ENST00000605804 496 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms