Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-6P-201ENST00000606623 107 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.32□□□□□ -1.4
PRIM1P49642 AL590240.4-201ENST00000616908 390 ntBASIC6.32□□□□□ -1.4
PRIM1P49642 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PRIM1P49642 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PRIM1P49642 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.32□□□□□ -1.4
PRIM1P49642 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PRIM1P49642 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
PRIM1P49642 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.31□□□□□ -1.4
PRIM1P49642 ZNF826P-207ENST00000622273 1910 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRIM1P49642 OR1L6-202ENST00000373684 1044 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 RNU6-47P-201ENST00000383866 107 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 RNU6-514P-201ENST00000384208 107 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 RNA5SP397-201ENST00000391323 118 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 AL035079.1-201ENST00000405210 287 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 RNU2-61P-201ENST00000411069 191 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 AL513331.1-201ENST00000411908 397 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 RPL21P40-201ENST00000428586 483 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 AL358472.1-201ENST00000431295 329 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC6.31□□□□□ -1.4
PRIM1P49642 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.31□□□□□ -1.4
PRIM1P49642 MIR4282-201ENST00000583613 67 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 MIR6716-201ENST00000613413 80 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRIM1P49642 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.31□□□□□ -1.4
PRIM1P49642 AC011944.2-201ENST00000624440 683 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 SDAD1P2-201ENST00000441308 2028 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.31□□□□□ -1.4
PRIM1P49642 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PRIM1P49642 AL731532.2-201ENST00000623542 1953 ntBASIC6.31□□□□□ -1.4
PRIM1P49642 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.31□□□□□ -1.4
PRIM1P49642 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC6.31□□□□□ -1.4
PRIM1P49642 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.31□□□□□ -1.4
PRIM1P49642 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
PRIM1P49642 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PRIM1P49642 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PRIM1P49642 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PRIM1P49642 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PRIM1P49642 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PRIM1P49642 UBE2L2-201ENST00000254302 429 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 RNU6-227P-201ENST00000362865 103 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 RNU5A-5P-201ENST00000411054 116 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 Y_RNA.623-201ENST00000411128 95 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AL117339.3-201ENST00000418733 162 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AL645608.4-201ENST00000423619 154 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AL592045.1-201ENST00000429867 352 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.3□□□□□ -1.4
PRIM1P49642 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.3□□□□□ -1.4
PRIM1P49642 AL691482.1-201ENST00000453255 87 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.3□□□□□ -1.4
PRIM1P49642 AP001324.2-201ENST00000461163 319 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AC011276.1-201ENST00000469688 323 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 SUMO2P6-201ENST00000505273 288 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.3□□□□□ -1.4
PRIM1P49642 IGHVII-62-1-201ENST00000519283 235 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 FAM60BP-201ENST00000578364 658 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 MIR3939-201ENST00000582614 106 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.3□□□□□ -1.4
PRIM1P49642 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC6.3□□□□□ -1.4
PRIM1P49642 U73479.1-201ENST00000618062 168 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 AL022311.1-201ENST00000623726 19416 ntBASIC6.3□□□□□ -1.4
PRIM1P49642 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.3□□□□□ -1.4
PRIM1P49642 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PRIM1P49642 AL391684.1-202ENST00000641293 1636 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
PRIM1P49642 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.29□□□□□ -1.4
PRIM1P49642 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.29□□□□□ -1.4
PRIM1P49642 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PRIM1P49642 RNU6-1290P-201ENST00000362957 109 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.82-201ENST00000363000 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.92-201ENST00000363043 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.235-201ENST00000364412 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.306-201ENST00000365015 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.312-201ENST00000365089 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.322-201ENST00000365151 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.383-201ENST00000383855 97 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 RNU6-804P-201ENST00000384286 107 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.650-201ENST00000459002 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.29□□□□□ -1.4
PRIM1P49642 AC104164.2-201ENST00000496953 495 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.777-201ENST00000516982 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PRIM1P49642 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC6.29□□□□□ -1.4
PRIM1P49642 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.29□□□□□ -1.4
PRIM1P49642 MIR4716-201ENST00000579628 84 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 MIR4512-201ENST00000583257 77 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 Y_RNA.771-201ENST00000598668 102 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 AL139395.1-201ENST00000603662 160 ntBASIC6.29□□□□□ -1.4
PRIM1P49642 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms