Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CXCL12P48061 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.14□□□□□ -2.07
CXCL12P48061 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL12P48061 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 PIGPP2-201ENST00000411569 458 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 SPA17P1-201ENST00000416656 452 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AC018630.2-202ENST00000422992 927 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 CR769776.1-201ENST00000441254 787 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL12P48061 MTCO1P27-201ENST00000448269 226 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 SNRPGP6-201ENST00000451124 220 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AP000705.1-201ENST00000454567 350 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL12P48061 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL12P48061 TTC39CP1-201ENST00000512513 755 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 MTCYBP43-201ENST00000513621 740 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 RNU6-1053P-201ENST00000515930 101 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 RN7SKP40-201ENST00000517211 242 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL12P48061 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL12P48061 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL12P48061 MTCO2P15-201ENST00000532655 656 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.13□□□□□ -2.07
CXCL12P48061 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.13□□□□□ -2.07
CXCL12P48061 MIR4498-201ENST00000577599 66 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.13□□□□□ -2.07
CXCL12P48061 MIR3670-2-201ENST00000582974 65 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 MIR3670-1-201ENST00000584160 65 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 MIR3670-3-201ENST00000584855 65 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.13□□□□□ -2.07
CXCL12P48061 AC013553.2-201ENST00000604244 589 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AL592221.1-201ENST00000605266 382 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 MIR3670-4-201ENST00000612260 65 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 AL139418.1-201ENST00000613613 177 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CXCL12P48061 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CXCL12P48061 ZNF876P-202ENST00000398732 1485 ntBASIC2.13□□□□□ -2.07
CXCL12P48061 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.12□□□□□ -2.07
CXCL12P48061 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CXCL12P48061 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL12P48061 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL12P48061 SNORA25.6-201ENST00000364121 118 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RNU1-51P-201ENST00000365345 176 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL12P48061 OR5H15-201ENST00000383696 930 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RNU6-157P-201ENST00000383957 107 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RNU6-637P-201ENST00000384050 107 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 MIR514A1-201ENST00000385133 98 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL12P48061 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL12P48061 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.12□□□□□ -2.07
CXCL12P48061 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL12P48061 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.12□□□□□ -2.07
CXCL12P48061 AL592045.1-201ENST00000429867 352 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RPL36AP6-201ENST00000435770 321 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL12P48061 PAXBP1P1-201ENST00000449315 447 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AC010099.1-201ENST00000455434 375 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RN7SKP210-201ENST00000459176 261 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AC073901.1-201ENST00000462471 408 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RPL9P33-201ENST00000484311 566 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RNA5SP182-201ENST00000516064 82 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 RNU6-311P-201ENST00000516224 102 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.12□□□□□ -2.07
CXCL12P48061 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL12P48061 MTND2P32-201ENST00000521584 1038 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.12□□□□□ -2.07
CXCL12P48061 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.12□□□□□ -2.07
CXCL12P48061 DUXAP1-201ENST00000556632 463 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AGGF1P5-201ENST00000567900 919 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AC005951.2-201ENST00000576282 495 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 VN1R82P-201ENST00000601481 356 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
CXCL12P48061 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CXCL12P48061 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CXCL12P48061 RNU6-853P-201ENST00000364306 107 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 RNU1-39P-201ENST00000383897 165 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 MIR627-201ENST00000384979 97 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 MIR325-201ENST00000385260 98 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CXCL12P48061 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CXCL12P48061 MIR320C1-201ENST00000408566 88 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 MIR1290-201ENST00000408735 78 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL12P48061 NDUFB4P7-201ENST00000423198 363 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 TAAR7P-201ENST00000436141 242 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL12P48061 AP000542.1-201ENST00000448473 371 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 RNU6-415P-201ENST00000516252 97 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 RNU6-1256P-201ENST00000516539 103 ntBASIC2.11□□□□□ -2.07
CXCL12P48061 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL12P48061 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL12P48061 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL12P48061 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms