Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 LRRC77P-213ENST00000637727 880 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.85□□□□□ -1.95
NKX2-1P43699 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.85□□□□□ -1.95
NKX2-1P43699 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
NKX2-1P43699 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.85□□□□□ -1.95
NKX2-1P43699 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NKX2-1P43699 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
NKX2-1P43699 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-1P43699 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
NKX2-1P43699 SNORD56.3-201ENST00000363507 71 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 Y_RNA.367-201ENST00000365544 101 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NKX2-1P43699 SMIM11P1-201ENST00000369586 178 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 MIR325-201ENST00000385260 98 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NKX2-1P43699 RNU6-1158P-201ENST00000391167 107 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 MIR1277-201ENST00000408536 78 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RAB28P1-201ENST00000411517 641 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AL356968.1-201ENST00000416622 474 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-1P43699 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-1P43699 SNRPEP10-201ENST00000420249 274 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.84□□□□□ -1.95
NKX2-1P43699 OR4C10P-201ENST00000434991 931 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RPS15AP9-201ENST00000439856 381 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RBMX2P4-201ENST00000441256 376 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 CALM1P1-201ENST00000442082 433 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.84□□□□□ -1.95
NKX2-1P43699 AC027673.1-201ENST00000456245 405 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RPS29P25-201ENST00000481709 171 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RPL39P36-201ENST00000490784 156 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC109927.2-201ENST00000506416 303 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 PHBP14-201ENST00000512887 367 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RNU6-835P-201ENST00000516974 104 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 RNA5SP290-201ENST00000517133 127 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC068657.1-201ENST00000520807 306 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AP001646.1-201ENST00000527936 915 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC109635.3-201ENST00000529536 185 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 OR8R1P-201ENST00000543943 764 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC007224.1-201ENST00000564410 144 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC037471.2-201ENST00000564941 598 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 DPPA3P3-201ENST00000603842 430 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AL161798.1-201ENST00000604630 131 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AL109618.2-201ENST00000605527 211 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC107294.3-201ENST00000609211 526 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 FTX_3.1-201ENST00000610451 147 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC005344.1-201ENST00000613391 459 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC093648.1-201ENST00000623546 606 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 MTND5P42-201ENST00000637720 498 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC110774.1-201ENST00000623567 2018 ntBASIC2.84□□□□□ -1.95
NKX2-1P43699 AC017071.1-201ENST00000564407 2204 ntBASIC2.84□□□□□ -1.96
NKX2-1P43699 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.84□□□□□ -1.96
NKX2-1P43699 ELF2P3-201ENST00000445099 1506 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 RN7SKP227-201ENST00000364445 330 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 RNU6-140P-201ENST00000384566 108 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 Y_RNA.573-201ENST00000384763 105 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 MIR1-2-201ENST00000384961 85 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 MIR888-201ENST00000401186 77 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 RNU6-908P-201ENST00000410160 94 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 MRPL50P2-201ENST00000416821 482 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AL109913.1-201ENST00000421173 514 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX2-1P43699 RPL23AP30-201ENST00000432419 501 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 AC008264.1-201ENST00000447612 367 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 FDX1P2-201ENST00000450769 375 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC010099.1-201ENST00000455434 375 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 RNU7-182P-201ENST00000459009 62 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 MRPS17P3-201ENST00000465453 385 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AL672167.3-201ENST00000465951 960 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AL121769.1-201ENST00000469473 401 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AC026801.1-201ENST00000497178 464 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 MTND4LP22-201ENST00000508209 276 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC098591.2-201ENST00000510152 315 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 RNU6-677P-201ENST00000516914 101 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX2-1P43699 AK6P1-201ENST00000540219 478 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AL512360.1-201ENST00000555346 234 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX2-1P43699 MIR4801-201ENST00000582704 82 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC098826.3-201ENST00000603823 466 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AL121992.2-201ENST00000606262 256 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC104458.1-201ENST00000608243 463 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
NKX2-1P43699 AC130324.3-201ENST00000614165 542 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC007014.2-201ENST00000615581 479 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC002553.4-201ENST00000616896 331 ntBASIC2.83□□□□□ -1.96
NKX2-1P43699 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX2-1P43699 RNA5SP196-201ENST00000625967 102 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms