Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 CCNG1P1-201ENST00000406783 885 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 RNA5SP492-201ENST00000411330 114 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 AC092447.7-201ENST00000422212 1621 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.06□□□□□ -1.92
HNF4AP41235 AC009296.1-201ENST00000443146 155 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC244505.5-201ENST00000443639 207 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AL160314.1-201ENST00000490836 438 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 SUMO2P6-201ENST00000505273 288 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 NDUFB4P2-201ENST00000509515 391 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 RNU6-1003P-201ENST00000517099 105 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.06□□□□□ -1.92
HNF4AP41235 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 AP003122.4-201ENST00000530980 758 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 AC245505.1-201ENST00000556398 224 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 EIF1P4-201ENST00000572664 335 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 MIR3913-1-201ENST00000577744 102 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 BNIP3P33-201ENST00000598912 569 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.06□□□□□ -1.92
HNF4AP41235 AC136601.2-201ENST00000604356 474 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.06□□□□□ -1.92
HNF4AP41235 FTX_3.1-201ENST00000610451 147 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HNF4AP41235 AC087241.4-201ENST00000612441 480 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 MIR7112-201ENST00000616126 65 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AL359740.1-201ENST00000624340 592 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 AC099654.13-201ENST00000639774 207 ntBASIC3.06□□□□□ -1.92
HNF4AP41235 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HNF4AP41235 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HNF4AP41235 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HNF4AP41235 Y_RNA.46-201ENST00000362695 102 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 SNORA51.4-201ENST00000364993 124 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 SNORD115.1-201ENST00000391109 76 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 MIR888-201ENST00000401186 77 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AL359704.1-201ENST00000411586 781 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC078974.1-201ENST00000411597 223 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 RPS3AP3-201ENST00000411933 242 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.05□□□□□ -1.92
HNF4AP41235 RPS3AP44-201ENST00000425466 790 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.05□□□□□ -1.92
HNF4AP41235 USP12PX-201ENST00000432383 1057 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC006028.1-201ENST00000438379 402 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 CYCSP32-201ENST00000440548 321 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.05□□□□□ -1.92
HNF4AP41235 AL358832.1-201ENST00000497800 389 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC112204.1-201ENST00000502591 103 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.05□□□□□ -1.92
HNF4AP41235 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.05□□□□□ -1.92
HNF4AP41235 RNU6-390P-201ENST00000516259 103 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.05□□□□□ -1.92
HNF4AP41235 AL157394.1-201ENST00000562983 1224 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC009063.1-201ENST00000563342 702 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC025281.1-201ENST00000567026 265 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 MIR5680-201ENST00000577577 84 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 HMGN2P15-201ENST00000585707 270 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.05□□□□□ -1.92
HNF4AP41235 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.05□□□□□ -1.92
HNF4AP41235 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.05□□□□□ -1.92
HNF4AP41235 AC008250.2-201ENST00000615261 205 ntBASIC3.05□□□□□ -1.92
HNF4AP41235 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.05□□□□□ -1.92
HNF4AP41235 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HNF4AP41235 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
HNF4AP41235 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HNF4AP41235 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.05□□□□□ -1.92
HNF4AP41235 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HNF4AP41235 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HNF4AP41235 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HNF4AP41235 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HNF4AP41235 MTND5P1-201ENST00000445440 1375 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 U3.6-201ENST00000363622 211 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 SNORD46.1-201ENST00000364139 104 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 RNU6-1215P-201ENST00000384441 102 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 Y_RNA.516-201ENST00000384541 124 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 U3.19-201ENST00000390893 196 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.04□□□□□ -1.92
HNF4AP41235 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.04□□□□□ -1.92
HNF4AP41235 NANOGNBP1-201ENST00000448444 480 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.04□□□□□ -1.92
HNF4AP41235 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.04□□□□□ -1.92
HNF4AP41235 SNRPFP4-201ENST00000456366 242 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.04□□□□□ -1.92
HNF4AP41235 RPL26P9-201ENST00000457466 433 ntBASIC3.04□□□□□ -1.92
HNF4AP41235 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.04□□□□□ -1.92
HNF4AP41235 AC013267.1-201ENST00000458227 267 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms