Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.91□□□□□ -1.94
CTNNA1P35221 AC023824.2-201ENST00000566185 400 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 ISCA1P3-201ENST00000577104 373 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 MIR4658-201ENST00000584344 65 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AC012493.2-201ENST00000595083 291 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AL451007.1-201ENST00000595491 289 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.91□□□□□ -1.94
CTNNA1P35221 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.91□□□□□ -1.94
CTNNA1P35221 AC024153.1-201ENST00000603103 365 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 SRGNP1-201ENST00000603392 451 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AL358072.1-201ENST00000604156 575 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 MIR92B-201ENST00000607575 96 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AC069200.1-201ENST00000609511 323 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 HMGB1P24-202ENST00000615653 685 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 uc_338.12-201ENST00000616344 181 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 AC009159.1-201ENST00000618386 642 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 MIR7157-201ENST00000635801 60 ntBASIC2.91□□□□□ -1.94
CTNNA1P35221 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CTNNA1P35221 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.91□□□□□ -1.94
CTNNA1P35221 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
CTNNA1P35221 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.9□□□□□ -1.94
CTNNA1P35221 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.9□□□□□ -1.94
CTNNA1P35221 NACAP2-201ENST00000318548 624 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CTNNA1P35221 MIR422A-201ENST00000362286 90 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 RNU4-28P-201ENST00000364739 141 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 RNU6-809P-201ENST00000384461 107 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 RNU6-220P-201ENST00000390919 107 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 RNA5SP171-201ENST00000391071 115 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC098592.1-201ENST00000419352 333 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AL353777.1-201ENST00000425552 326 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AL592045.1-201ENST00000429867 352 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 COX6CP12-201ENST00000446748 202 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 SNORD97-201ENST00000459187 142 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 MTND2P14-201ENST00000482139 351 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC139453.3-201ENST00000493276 369 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.9□□□□□ -1.95
CTNNA1P35221 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AL121821.2-201ENST00000556081 394 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNNA1P35221 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNNA1P35221 VN1R90P-201ENST00000595717 726 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC005261.5-201ENST00000596280 355 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AC007363.1-201ENST00000604736 620 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AL391813.2-201ENST00000609113 322 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AL050303.3-201ENST00000613704 284 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AL589994.2-201ENST00000621124 579 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 FRG1KP-201ENST00000623592 341 ntBASIC2.9□□□□□ -1.95
CTNNA1P35221 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.9□□□□□ -1.95
CTNNA1P35221 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.9□□□□□ -1.95
CTNNA1P35221 MTND4P35-201ENST00000604257 1375 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
CTNNA1P35221 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.89□□□□□ -1.95
CTNNA1P35221 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA1P35221 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA1P35221 RNU6-14P-201ENST00000384630 106 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AL389915.1-201ENST00000422463 466 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA1P35221 RPL37P21-201ENST00000435890 276 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 RPL22P17-201ENST00000438729 315 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 GDI2P2-201ENST00000445131 608 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AL606662.1-201ENST00000445763 553 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 MTND5P30-201ENST00000452896 1731 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AP000705.1-201ENST00000454567 350 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 RNU6-953P-201ENST00000459154 107 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 RPS29P26-201ENST00000477483 171 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.89□□□□□ -1.95
CTNNA1P35221 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 RNU6-143P-201ENST00000516942 93 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 RNU6-201P-201ENST00000517100 61 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AP003461.1-201ENST00000528866 78 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC009163.5-201ENST00000575421 637 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.89□□□□□ -1.95
CTNNA1P35221 AP001981.2-201ENST00000603241 418 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC008121.1-201ENST00000603244 268 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AP000860.1-201ENST00000605250 559 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC121334.2-201ENST00000605387 271 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AC010678.1-201ENST00000614118 713 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
CTNNA1P35221 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA1P35221 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CTNNA1P35221 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CTNNA1P35221 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms