Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RAC1P7-201ENST00000445367 377 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA9P31269 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HOXA9P31269 SNORA31.18-201ENST00000517043 134 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.4□□□□□ -2.03
HOXA9P31269 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.4□□□□□ -2.03
HOXA9P31269 AP003497.1-201ENST00000528472 562 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA9P31269 AC136618.2-201ENST00000575091 400 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC087683.2-201ENST00000611384 326 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AL137847.3-201ENST00000611521 109 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA9P31269 AL590099.1-201ENST00000615276 138 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC007490.1-201ENST00000624321 703 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 AC017037.3-201ENST00000625016 472 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.4□□□□□ -2.03
HOXA9P31269 AC008568.2-201ENST00000623862 2313 ntBASIC2.4□□□□□ -2.03
HOXA9P31269 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA9P31269 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HOXA9P31269 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXA9P31269 RNU6-744P-201ENST00000365557 107 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 RNU6-1316P-201ENST00000384242 108 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 MIR524-201ENST00000385242 87 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 RNU6-1197P-201ENST00000391183 107 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA9P31269 AL445669.1-201ENST00000426743 755 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC009414.1-201ENST00000427200 443 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.39□□□□□ -2.03
HOXA9P31269 MTND1P20-201ENST00000430341 950 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 HMGN2P3-201ENST00000433603 273 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC092573.2-201ENST00000434546 243 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 HMGN2P5-201ENST00000436882 273 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXA9P31269 AL109741.2-201ENST00000455561 343 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXA9P31269 SNORD121B-201ENST00000458838 81 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 snoU13.28-201ENST00000459235 104 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 MTND4LP3-201ENST00000468320 276 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.39□□□□□ -2.03
HOXA9P31269 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 MTCYBP20-201ENST00000524239 1129 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC009094.1-201ENST00000564443 426 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 ACTR3BP3-201ENST00000565577 979 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 MIR3117-201ENST00000584034 78 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC021171.1-201ENST00000603137 706 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 Z99289.3-201ENST00000605586 594 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC090186.1-201ENST00000605991 572 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC104237.2-201ENST00000612456 443 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AC002550.2-201ENST00000621246 394 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 PISRT1-201ENST00000626175 531 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC103706.2-201ENST00000638080 240 ntBASIC2.39□□□□□ -2.03
HOXA9P31269 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.39□□□□□ -2.03
HOXA9P31269 AC009812.4-201ENST00000569134 1805 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA9P31269 RNU6-461P-201ENST00000364195 107 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 U8.8-201ENST00000365399 135 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 RNU6-723P-201ENST00000383973 107 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 RNU6-1207P-201ENST00000384343 107 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AL022400.1-201ENST00000423946 935 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 AL358075.3-201ENST00000426289 226 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXA9P31269 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXA9P31269 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 CR769767.1-201ENST00000436337 346 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 SNRPEP7-201ENST00000438350 220 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 MTCYBP3-201ENST00000445588 1137 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC011753.1-201ENST00000451001 220 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 OR6C5P-201ENST00000452388 923 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXA9P31269 AC087588.1-201ENST00000462203 316 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.38□□□□□ -2.03
HOXA9P31269 FAM172BP-201ENST00000487497 1089 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC135721.1-201ENST00000497954 479 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 AC024589.1-201ENST00000512207 263 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HOXA9P31269 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 RNU6-528P-201ENST00000516926 100 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 SUB1P1-201ENST00000524415 382 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXA9P31269 AP003461.1-201ENST00000528866 78 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.38□□□□□ -2.03
HOXA9P31269 LRRC34P1-201ENST00000542742 915 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.38□□□□□ -2.03
HOXA9P31269 ZNF321P-202ENST00000550843 495 ntBASIC2.38□□□□□ -2.03
HOXA9P31269 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms