Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL158063.1-201ENST00000615349 536 ntBASIC3.41□□□□□ -1.86
TM4SF1P30408 Z69908.1-201ENST00000622603 247 ntBASIC3.41□□□□□ -1.86
TM4SF1P30408 AC073308.1-201ENST00000623696 305 ntBASIC3.41□□□□□ -1.86
TM4SF1P30408 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.41□□□□□ -1.86
TM4SF1P30408 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF1P30408 AP001486.2-201ENST00000561652 5113 ntBASIC3.41□□□□□ -1.86
TM4SF1P30408 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TM4SF1P30408 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TM4SF1P30408 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TM4SF1P30408 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TM4SF1P30408 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 U3.4-201ENST00000363352 213 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 RNY1P12-201ENST00000364251 105 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AL139039.1-201ENST00000401900 692 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 MIR1302-8-201ENST00000408342 128 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AMD1P2-201ENST00000412936 992 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 RAC1P6-201ENST00000423911 575 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.4□□□□□ -1.87
TM4SF1P30408 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 USP9YP15-201ENST00000442391 422 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TM4SF1P30408 AL033528.1-201ENST00000453780 140 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 RPL21P41-201ENST00000459863 264 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AC010468.1-201ENST00000461022 817 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 KCTD9P5-201ENST00000504141 1170 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AC091965.2-201ENST00000512324 613 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 HPRT1P3-201ENST00000539521 576 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.4□□□□□ -1.87
TM4SF1P30408 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.4□□□□□ -1.87
TM4SF1P30408 MIR4293-201ENST00000584305 78 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AC025594.3-201ENST00000613068 790 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.4□□□□□ -1.87
TM4SF1P30408 AC091953.2-201ENST00000623979 160 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 CTSLP2-204ENST00000629029 392 ntBASIC3.4□□□□□ -1.87
TM4SF1P30408 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
TM4SF1P30408 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM4SF1P30408 MIR512-1-201ENST00000384913 84 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 MIR325-201ENST00000385260 98 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 RNU2-33P-201ENST00000410344 192 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 Z85995.1-201ENST00000415547 335 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.39□□□□□ -1.87
TM4SF1P30408 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 HIGD1AP11-201ENST00000438361 280 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AL513043.1-201ENST00000439124 535 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 PIGFP3-201ENST00000441918 722 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 Z83846.1-201ENST00000446798 265 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 MTND1P27-201ENST00000451117 902 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 RBM43P1-201ENST00000476891 1081 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.39□□□□□ -1.87
TM4SF1P30408 AL160314.1-201ENST00000490836 438 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.39□□□□□ -1.87
TM4SF1P30408 ANXA2P1-201ENST00000505539 926 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.39□□□□□ -1.87
TM4SF1P30408 RNU6-927P-201ENST00000516199 100 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC060788.1-201ENST00000521318 469 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC107934.1-201ENST00000522215 217 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 AL356057.1-201ENST00000533798 831 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.39□□□□□ -1.87
TM4SF1P30408 MIR4769-201ENST00000584126 77 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC009977.1-201ENST00000586015 570 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AL161729.4-201ENST00000604650 476 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 AC090115.4-201ENST00000609970 188 ntBASIC3.39□□□□□ -1.87
TM4SF1P30408 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TM4SF1P30408 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TM4SF1P30408 Y_RNA.77-201ENST00000362962 107 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 SNORA40.3-201ENST00000390964 122 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 NDUFS5P1-201ENST00000405668 289 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 RN7SKP142-201ENST00000411236 328 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 SEPT2P1-201ENST00000419651 180 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.38□□□□□ -1.87
TM4SF1P30408 RPL23AP22-201ENST00000437556 453 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.38□□□□□ -1.87
TM4SF1P30408 TAF9P1-201ENST00000445421 515 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 TAF9P2-201ENST00000454958 515 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 MTND4LP3-201ENST00000468320 276 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AC010587.1-201ENST00000505809 469 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 RN7SKP43-201ENST00000516173 320 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 RNU7-51P-201ENST00000516560 62 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.38□□□□□ -1.87
TM4SF1P30408 AC137800.2-201ENST00000574375 120 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 MIR4524B-201ENST00000581569 115 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 MIR3118-1-201ENST00000581787 76 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AC005771.1-201ENST00000585581 349 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.38□□□□□ -1.87
TM4SF1P30408 AC131902.3-201ENST00000611767 581 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 AP001506.1-201ENST00000615444 211 ntBASIC3.38□□□□□ -1.87
TM4SF1P30408 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms