Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC024614.3-201ENST00000637860 256 ntBASIC4.34□□□□□ -1.71
CNGA1P29973 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNGA1P29973 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CNGA1P29973 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.34□□□□□ -1.72
CNGA1P29973 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CNGA1P29973 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNGA1P29973 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CNGA1P29973 HSPA8P1-201ENST00000425843 1833 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 ZNF807-201ENST00000328088 1707 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 ASNSP3-201ENST00000451989 1306 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 MIR423-201ENST00000362201 94 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 RNA5SP51-201ENST00000364750 119 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 MIR634-201ENST00000385208 97 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 CISD1P1-201ENST00000393907 327 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 FGF7P8-201ENST00000402994 292 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.33□□□□□ -1.72
CNGA1P29973 AC007919.1-201ENST00000429380 217 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.33□□□□□ -1.72
CNGA1P29973 Z82210.1-201ENST00000440037 231 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 CYCSP32-201ENST00000440548 321 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 RNU6-358P-201ENST00000516564 75 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 RNA5SP291-201ENST00000517222 105 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.33□□□□□ -1.72
CNGA1P29973 CASP1P1-201ENST00000526345 212 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 GNRHR2P1-201ENST00000555315 631 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.33□□□□□ -1.72
CNGA1P29973 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CNGA1P29973 MIR15A-201ENST00000607334 83 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 AL591424.2-201ENST00000617023 128 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 AC002546.1-201ENST00000588041 2504 ntBASIC4.33□□□□□ -1.72
CNGA1P29973 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.33□□□□□ -1.72
CNGA1P29973 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.32□□□□□ -1.72
CNGA1P29973 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 RNU6-512P-201ENST00000364438 103 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 Y_RNA.390-201ENST00000383932 102 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AL591034.1-201ENST00000407447 340 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.32□□□□□ -1.72
CNGA1P29973 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.32□□□□□ -1.72
CNGA1P29973 ATP5JP1-201ENST00000431631 322 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 SNORA71B-202ENST00000439232 272 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 HMGB1P37-201ENST00000439613 609 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 PIGFP3-201ENST00000441918 722 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.32□□□□□ -1.72
CNGA1P29973 AC104058.1-201ENST00000448028 297 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 RPS3AP46-201ENST00000448352 682 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 BX510359.1-201ENST00000456973 237 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 SNRPFP3-201ENST00000457792 225 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 RPL37P6-201ENST00000460682 294 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 KC877373.1-201ENST00000479066 408 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.32□□□□□ -1.72
CNGA1P29973 RNU4-29P-201ENST00000515943 174 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 RNU6-914P-201ENST00000516749 109 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.32□□□□□ -1.72
CNGA1P29973 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.32□□□□□ -1.72
CNGA1P29973 MIR4424-201ENST00000585257 86 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AC060780.3-201ENST00000589464 80 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AL138889.2-201ENST00000603883 242 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 AL035413.2-201ENST00000604801 525 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 uc_338.32-201ENST00000615087 172 ntBASIC4.32□□□□□ -1.72
CNGA1P29973 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.32□□□□□ -1.72
CNGA1P29973 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.32□□□□□ -1.72
CNGA1P29973 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
CNGA1P29973 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
CNGA1P29973 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CNGA1P29973 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CNGA1P29973 AC118273.1-201ENST00000525324 3006 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 MFSD8-236ENST00000641509 4050 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNGA1P29973 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CNGA1P29973 RNA5SP118-201ENST00000410385 109 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 RPL30P16-201ENST00000419341 429 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 MTND4LP11-201ENST00000422184 280 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AL160275.3-201ENST00000423876 471 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 RPL36AP53-201ENST00000432891 316 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC073063.1-201ENST00000434352 607 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 FABP5P15-201ENST00000453566 214 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 SNRPGP3-201ENST00000469405 227 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 RPL23AP11-201ENST00000475260 469 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AL135752.1-201ENST00000479477 471 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.31□□□□□ -1.72
CNGA1P29973 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.31□□□□□ -1.72
CNGA1P29973 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.31□□□□□ -1.72
CNGA1P29973 RNA5SP164-201ENST00000516533 110 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.31□□□□□ -1.72
CNGA1P29973 AC118273.2-201ENST00000532092 465 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.31□□□□□ -1.72
CNGA1P29973 BNIP3P9-201ENST00000603714 553 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AL670379.4-201ENST00000605279 254 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC079684.1-201ENST00000621405 437 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC099654.14-201ENST00000638599 341 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 AC119674.1-207ENST00000641355 633 ntBASIC4.31□□□□□ -1.72
CNGA1P29973 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CNGA1P29973 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CNGA1P29973 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms