Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.89□□□□□ -2.11
COL5A1P20908 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC093519.1-201ENST00000566109 298 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 MIR3683-201ENST00000580847 82 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC110760.3-201ENST00000598794 467 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AL590229.1-201ENST00000603497 542 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AL031281.1-201ENST00000604049 488 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC243773.3-201ENST00000613270 256 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC011939.3-201ENST00000613686 466 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL5A1P20908 AL356596.1-201ENST00000624230 379 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC068137.4-201ENST00000638485 296 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 Y_RNA.51-201ENST00000362725 102 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 Y_RNA.436-201ENST00000384097 102 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 SNORA51.12-201ENST00000384448 134 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MIR506-201ENST00000384998 124 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MT-TH-201ENST00000387441 69 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 AL121978.1-201ENST00000402778 359 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MIR1276-201ENST00000408707 83 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNU6-757P-201ENST00000410334 100 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNU4-72P-201ENST00000410754 173 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC068533.2-201ENST00000411872 306 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL5A1P20908 AC096632.1-201ENST00000427395 310 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTND2P20-201ENST00000440805 661 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MTND1P30-201ENST00000441241 901 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC009237.8-201ENST00000445492 379 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTND2P19-201ENST00000449129 1012 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTCO2P18-201ENST00000457151 658 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 ARPC3P2-201ENST00000457786 533 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC005912.1-201ENST00000495392 255 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 MTND1P22-201ENST00000510572 951 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MTCYBP37-201ENST00000510642 1133 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 RNA5SP216-201ENST00000516111 123 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 MIR4303-201ENST00000581299 66 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC004987.4-201ENST00000603383 338 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC069304.3-201ENST00000603938 1084 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC006270.3-201ENST00000605967 1036 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.89□□□□□ -2.11
COL5A1P20908 AC245297.2-201ENST00000610119 565 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC104073.3-201ENST00000610942 955 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 AC006065.5-201ENST00000623427 349 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 U6.101-201ENST00000637707 76 ntBASIC1.89□□□□□ -2.11
COL5A1P20908 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL5A1P20908 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL5A1P20908 AC011477.1-204ENST00000623416 1325 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AC005336.3-201ENST00000623833 2679 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL5A1P20908 RNU6-1122P-201ENST00000384449 107 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 SNORA67.5-201ENST00000391036 107 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AL590084.2-201ENST00000401481 382 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 RPL23AP47-201ENST00000408017 460 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 RNU2-71P-201ENST00000411395 189 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 MTCYBP38-201ENST00000417160 1123 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.88□□□□□ -2.11
COL5A1P20908 RPL31P3-201ENST00000458430 332 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AC147055.4-201ENST00000504399 745 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
COL5A1P20908 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 RNU6-1225P-201ENST00000516336 65 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 RNU6-1261P-201ENST00000517194 104 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AP000790.1-201ENST00000528891 737 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.88□□□□□ -2.11
COL5A1P20908 AC002400.1-201ENST00000569310 726 ntBASIC1.88□□□□□ -2.11
COL5A1P20908 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms